Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-283 |
| Cow position: | chr22:34476393-34476111 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 2-262 |
| Cow position: | chr22:4645385-4645647 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 91 |
| Conread position: | 2-283 |
| Cow position: | chr22:43292301-43292005 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 284 |
| Conread position: | 2-286 |
| Cow position: | chr22:10685471-10685191 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 65 |
| Conread position: | 4-262 |
| Cow position: | chr22:31870642-31870387 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 166 |
| Conread position: | 4-271 |
| Cow position: | chr22:11130485-11130753 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 133, 87 |
| Conread position: | 4-272 |
| Cow position: | chr22:26106667-26106942 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 4-273 |
| Cow position: | chr22:1064744-1065019 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 4-273 |
| Cow position: | chr22:32326421-32326688 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 205, 51 |
| Conread position: | 4-275 |
| Cow position: | chr22:26184551-26184275 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 160 |
| Conread position: | 4-276 |
| Cow position: | chr22:13688502-13688224 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 65 |
| Conread position: | 4-276 |
| Cow position: | chr22:25246519-25246797 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-281 |
| Cow position: | chr22:5836842-5837124 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 4-283 |
| Cow position: | chr22:13720924-13720632 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 133, 280 |
| Conread position: | 4-283 |
| Cow position: | chr22:17813846-17814117 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 93 |
| Conread position: | 4-283 |
| Cow position: | chr22:26316088-26316362 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 144 |
| Conread position: | 5-253 |
| Cow position: | chr22:30514866-30515117 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 41 |
| Conread position: | 5-262 |
| Cow position: | chr22:321876-321605 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 125, 168 |
| Conread position: | 5-273 |
| Cow position: | chr22:3987120-3987401 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 7, 172 |
| Conread position: | 5-283 |
| Cow position: | chr22:45106302-45106023 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 6-283 |
| Cow position: | chr22:33448475-33448190 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 219 |
| Conread position: | 7-283 |
| Cow position: | chr22:14376783-14376511 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 12-273 |
| Cow position: | chr22:3941898-3942169 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 18-286 |
| Cow position: | chr22:38940325-38940052 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 97 |
| Conread position: | 29-262 |
| Cow position: | chr22:41983070-41982841 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 182, 88 |
| Conread position: | 37-283 |
| Cow position: | chr22:23865104-23865360 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 127 |
| Conread position: | 38-283 |
| Cow position: | chr22:28120434-28120687 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 241 |
| Conread position: | 43-275 |
| Cow position: | chr22:16532714-16532966 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 230 |
| Conread position: | 46-283 |
| Cow position: | chr22:12968402-12968178 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 72 |
| Conread position: | 54-262 |
| Cow position: | chr22:30698839-30699053 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 70-286 |
| Cow position: | chr22:41244917-41245141 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 79-276 |
| Cow position: | chr22:8840271-8840475 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 88-273 |
| Cow position: | chr22:2502531-2502720 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 126, 76 |
| Conread position: | 125-270 |
| Cow position: | chr22:845633-845784 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 125-274 |
| Cow position: | chr22:9372250-9372398 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 125-283 |
| Cow position: | chr22:25341750-25341912 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 126-283 |
| Cow position: | chr22:12946435-12946275 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 129-287 |
| Cow position: | chr22:15090474-15090638 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 137-282 |
| Cow position: | chr22:34606335-34606475 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 29 |
Show alignments to all cow chromosomes.