Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-267 |
| Cow position: | chr25:17119578-17119309 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 1-274 |
| Cow position: | chr25:35585913-35585633 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 213, 184 |
| Conread position: | 1-275 |
| Cow position: | chr25:4049641-4049919 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 4-262 |
| Cow position: | chr25:2110694-2110952 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 4-262 |
| Cow position: | chr25:26238483-26238746 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 4-274 |
| Cow position: | chr25:1735700-1735425 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 123 |
| Conread position: | 4-276 |
| Cow position: | chr25:25827071-25827355 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 156 |
| Conread position: | 4-276 |
| Cow position: | chr25:30319839-30319560 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 4-283 |
| Cow position: | chr25:9396065-9396344 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 159 |
| Conread position: | 4-283 |
| Cow position: | chr25:17658225-17658506 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 5-273 |
| Cow position: | chr25:3145457-3145730 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 216 |
| Conread position: | 5-273 |
| Cow position: | chr25:26849437-26849157 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 5-289 |
| Cow position: | chr25:26087125-26087421 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 17-277 |
| Cow position: | chr25:4897720-4897988 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 19-273 |
| Cow position: | chr25:1837868-1838123 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 97 |
| Conread position: | 19-281 |
| Cow position: | chr25:33255997-33256259 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 19-283 |
| Cow position: | chr25:12239510-12239252 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 194, 8 |
| Conread position: | 48-266 |
| Cow position: | chr25:15273344-15273568 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 50-274 |
| Cow position: | chr25:37629248-37629019 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 52-281 |
| Cow position: | chr25:21245948-21245712 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 112 |
| Conread position: | 98-273 |
| Cow position: | chr25:448641-448459 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 98-276 |
| Cow position: | chr25:6474396-6474206 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 104-286 |
| Cow position: | chr25:21895177-21894989 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 121-272 |
| Cow position: | chr25:14512843-14512996 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 125-283 |
| Cow position: | chr25:22203959-22203792 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 156 |
Show alignments to all cow chromosomes.