Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               4-276
               

               Cow position:
               chr27:15866565-15866289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 138
               

               Conread position:
               4-281
               

               Cow position:
               chr27:29799278-29799004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 8
               

               Conread position:
               14-283
               

               Cow position:
               chr27:26427794-26428071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 265
               

               Conread position:
               19-283
               

               Cow position:
               chr27:27040927-27040667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               6, 83
               

               Conread position:
               95-283
               

               Cow position:
               chr27:12516450-12516253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               98-283
               

               Cow position:
               chr27:24014491-24014678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               117, 66
               

               Conread position:
               135-287
               

               Cow position:
               chr27:28164198-28164348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               141-283
               

               Cow position:
               chr27:25277342-25277199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 7
               
Show alignments to all cow chromosomes.