Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 4-273 |
| Cow position: | chr28:15375204-15374928 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 113 |
| Conread position: | 4-273 |
| Cow position: | chr28:19222527-19222248 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-273 |
| Cow position: | chr28:28798675-28798398 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 4-281 |
| Cow position: | chr28:14150857-14151135 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 7 |
| Conread position: | 4-283 |
| Cow position: | chr28:18354688-18354423 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 4-283 |
| Cow position: | chr28:20312891-20313175 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 190 |
| Conread position: | 4-283 |
| Cow position: | chr28:25806220-25806472 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-286 |
| Cow position: | chr28:18717507-18717216 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 133 |
| Conread position: | 5-271 |
| Cow position: | chr28:26781702-26781979 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 5-273 |
| Cow position: | chr28:1508754-1509032 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 201, 83 |
| Conread position: | 5-276 |
| Cow position: | chr28:21104226-21103948 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 6-283 |
| Cow position: | chr28:3479885-3480172 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 266 |
| Conread position: | 13-283 |
| Cow position: | chr28:15272632-15272358 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 91 |
| Conread position: | 16-286 |
| Cow position: | chr28:30303557-30303287 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 198, 77 |
| Conread position: | 40-273 |
| Cow position: | chr28:14933616-14933859 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 124 |
| Conread position: | 40-278 |
| Cow position: | chr28:16441044-16441281 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 77 |
| Conread position: | 45-283 |
| Cow position: | chr28:7698318-7698080 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 56 |
| Conread position: | 48-262 |
| Cow position: | chr28:7549400-7549176 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 166, 116 |
| Conread position: | 51-272 |
| Cow position: | chr28:17638199-17637974 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 52-273 |
| Cow position: | chr28:7590517-7590288 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 76-283 |
| Cow position: | chr28:6059777-6059565 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 88-289 |
| Cow position: | chr28:23008026-23007826 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 76, 128 |
| Conread position: | 104-283 |
| Cow position: | chr28:26784750-26784565 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 172 |
| Conread position: | 127-241 |
| Cow position: | chr28:19026262-19026148 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 88 |
| Conread position: | 136-283 |
| Cow position: | chr28:22321172-22321326 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 34 |
Show alignments to all cow chromosomes.