Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-283 |
| Cow position: | chr29:29066035-29066319 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 98 |
| Conread position: | 4-271 |
| Cow position: | chr29:4327106-4327376 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 160 |
| Conread position: | 4-272 |
| Cow position: | chr29:25088346-25088639 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 4-272 |
| Cow position: | chr29:29632326-29632047 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 4-279 |
| Cow position: | chr29:16609352-16609634 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 4-283 |
| Cow position: | chr29:87401-87123 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 4-283 |
| Cow position: | chr29:7666418-7666132 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 4-283 |
| Cow position: | chr29:28868242-28868529 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 276 |
| Conread position: | 4-286 |
| Cow position: | chr29:35291709-35291988 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 211 |
| Conread position: | 11-259 |
| Cow position: | chr29:26771044-26771309 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 168 |
| Conread position: | 13-283 |
| Cow position: | chr29:7956345-7956088 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 201, 64 |
| Conread position: | 14-283 |
| Cow position: | chr29:2744651-2744379 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 261 |
| Conread position: | 15-283 |
| Cow position: | chr29:32800085-32799815 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 203 |
| Conread position: | 18-284 |
| Cow position: | chr29:21443719-21443447 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 253 |
| Conread position: | 28-276 |
| Cow position: | chr29:34535589-34535332 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 30-283 |
| Cow position: | chr29:4625356-4625100 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 162 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 181, 241 |
| Conread position: | 40-283 |
| Cow position: | chr29:6293817-6293581 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-273 |
| Cow position: | chr29:20626237-20626462 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 161, 111 |
| Conread position: | 88-286 |
| Cow position: | chr29:2644613-2644405 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 103-272 |
| Cow position: | chr29:3395823-3395992 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 109-252 |
| Cow position: | chr29:10296724-10296574 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 115-259 |
| Cow position: | chr29:39111586-39111442 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 115, 91 |
| Conread position: | 125-283 |
| Cow position: | chr29:2984619-2984781 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 129-262 |
| Cow position: | chr29:29769610-29769475 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 133-290 |
| Cow position: | chr29:21236856-21237019 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 81, 144 |
| Conread position: | 134-281 |
| Cow position: | chr29:35738529-35738373 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 141 |
Show alignments to all cow chromosomes.