Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 170
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 13
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 34
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               84, 169
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 187
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 169
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 160
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 160
               

               Conread position:
               4-279
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 188
               

               Conread position:
               4-279
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 113
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 7
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 146
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 80
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 159
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               209, 84
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 286
               

               Conread position:
               9-273
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               11-274
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               68, 162
               

               Conread position:
               11-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               200, 281
               

               Conread position:
               15-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 120
               

               Conread position:
               17-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               17-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 262
               

               Conread position:
               18-280
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 255
               

               Conread position:
               18-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 262
               

               Conread position:
               18-289
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 96
               

               Conread position:
               24-276
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 129
               

               Conread position:
               26-276
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               37-286
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 238
               

               Conread position:
               47-272
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               53-283
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               161, 226
               

               Conread position:
               60-283
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               156, 88
               

               Conread position:
               79-288
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               137, 38
               

               Conread position:
               110-273
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               110-276
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               110-279
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               110-283
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               112-279
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 162
               

               Conread position:
               124-286
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               103, 94
               

               Conread position:
               127-277
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               127-281
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               127-286
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 143
               

               Conread position:
               129-286
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 153
               

               Conread position:
               133-283
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               135-276
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.