Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-276 |
| Cow position: | chr7:11903655-11903941 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 1-283 |
| Cow position: | chr7:63298928-63299204 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 213, 122 |
| Conread position: | 2-272 |
| Cow position: | chr7:52294787-52295061 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 2-283 |
| Cow position: | chr7:24778459-24778179 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 148 |
| Conread position: | 2-283 |
| Cow position: | chr7:43109872-43109594 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 2-286 |
| Cow position: | chr7:43484910-43484618 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 4-272 |
| Cow position: | chr7:5241776-5242047 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 113 |
| Conread position: | 4-273 |
| Cow position: | chr7:20035607-20035326 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 4-278 |
| Cow position: | chr7:57517534-57517822 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-281 |
| Cow position: | chr7:34004022-34004303 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-283 |
| Cow position: | chr7:19267715-19267432 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 271 |
| Conread position: | 4-283 |
| Cow position: | chr7:26888303-26888020 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 209, 104 |
| Conread position: | 4-283 |
| Cow position: | chr7:28563726-28563443 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 82 |
| Conread position: | 4-283 |
| Cow position: | chr7:34433625-34433342 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 180 |
| Conread position: | 4-283 |
| Cow position: | chr7:53361726-53361441 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 273 |
| Conread position: | 4-283 |
| Cow position: | chr7:53992356-53992638 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 113 |
| Conread position: | 4-283 |
| Cow position: | chr7:66894886-66894602 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 273 |
| Conread position: | 4-286 |
| Cow position: | chr7:3728748-3729033 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 109 |
| Conread position: | 4-286 |
| Cow position: | chr7:26838308-26838598 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 111 |
| Conread position: | 4-286 |
| Cow position: | chr7:56820920-56820630 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 274 |
| Conread position: | 5-271 |
| Cow position: | chr7:60726559-60726293 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-272 |
| Cow position: | chr7:205419-205677 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 51 |
| Conread position: | 5-283 |
| Cow position: | chr7:49942758-49942488 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 5-285 |
| Cow position: | chr7:42431480-42431769 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 122 |
| Conread position: | 18-276 |
| Cow position: | chr7:54089870-54090140 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 24-283 |
| Cow position: | chr7:46823353-46823606 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 26-283 |
| Cow position: | chr7:29474369-29474632 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 135 |
| Conread position: | 30-262 |
| Cow position: | chr7:13928490-13928235 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 57-276 |
| Cow position: | chr7:32712534-32712307 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 157, 60 |
| Conread position: | 62-281 |
| Cow position: | chr7:20415591-20415368 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 102 |
| Conread position: | 97-273 |
| Cow position: | chr7:48900085-48899912 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 103-262 |
| Cow position: | chr7:10449030-10448861 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 89 |
| Conread position: | 103-273 |
| Cow position: | chr7:32813501-32813325 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 111-258 |
| Cow position: | chr7:23982726-23982870 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 111-276 |
| Cow position: | chr7:40894282-40894458 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 115-286 |
| Cow position: | chr7:44095175-44095000 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 125-253 |
| Cow position: | chr7:32260497-32260369 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 89 |
| Conread position: | 125-275 |
| Cow position: | chr7:34568975-34569136 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 125-289 |
| Cow position: | chr7:8776974-8777147 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 164 |
| Conread position: | 127-283 |
| Cow position: | chr7:45658607-45658449 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 136-283 |
| Cow position: | chr7:16022088-16022234 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 135 |
| Conread position: | 137-273 |
| Cow position: | chr7:42894238-42894376 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.