Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-283 |
| Cow position: | chr8:31253427-31253717 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 278 |
| Conread position: | 4-272 |
| Cow position: | chr8:6746524-6746251 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 4-272 |
| Cow position: | chr8:52309103-52308828 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 4-278 |
| Cow position: | chr8:60489006-60488723 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 4-283 |
| Cow position: | chr8:33584769-33585067 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 4-283 |
| Cow position: | chr8:56885943-56886228 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 169 |
| Conread position: | 5-284 |
| Cow position: | chr8:36648824-36648547 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 10-286 |
| Cow position: | chr8:11057771-11058068 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 11-272 |
| Cow position: | chr8:6233268-6233000 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 17-271 |
| Cow position: | chr8:38561371-38561116 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 202, 7 |
| Conread position: | 17-283 |
| Cow position: | chr8:17199802-17199527 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 152 |
| Conread position: | 20-286 |
| Cow position: | chr8:20384432-20384689 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 24-283 |
| Cow position: | chr8:24872226-24871967 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 143 |
| Conread position: | 29-276 |
| Cow position: | chr8:30230023-30229769 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 246 |
| Conread position: | 37-286 |
| Cow position: | chr8:12303105-12303360 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 174, 79 |
| Conread position: | 40-273 |
| Cow position: | chr8:5176851-5177083 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 174, 48 |
| Conread position: | 46-276 |
| Cow position: | chr8:22183236-22183478 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 53-262 |
| Cow position: | chr8:21268849-21268636 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 163, 61 |
| Conread position: | 54-281 |
| Cow position: | chr8:43986539-43986311 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 217 |
| Conread position: | 59-271 |
| Cow position: | chr8:55208282-55208502 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 63-258 |
| Cow position: | chr8:50937469-50937667 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 151, 88 |
| Conread position: | 64-272 |
| Cow position: | chr8:50898417-50898632 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 65-286 |
| Cow position: | chr8:24832056-24832284 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 222 |
| Conread position: | 65-289 |
| Cow position: | chr8:58519985-58520203 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 71-283 |
| Cow position: | chr8:4940620-4940403 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 72-283 |
| Cow position: | chr8:35828114-35827900 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 142, 92 |
| Conread position: | 73-273 |
| Cow position: | chr8:39321020-39321214 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 79-319 |
| Cow position: | chr8:19204946-19204705 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 191 |
| Conread position: | 81-274 |
| Cow position: | chr8:8924644-8924450 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 81-281 |
| Cow position: | chr8:24364235-24364037 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 135, 81 |
| Conread position: | 88-283 |
| Cow position: | chr8:35966325-35966124 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 91-286 |
| Cow position: | chr8:55360275-55360477 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 127, 196 |
| Conread position: | 96-283 |
| Cow position: | chr8:37571994-37571798 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 97-275 |
| Cow position: | chr8:24201619-24201807 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 117-286 |
| Cow position: | chr8:45664513-45664684 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 5 |
| Conread position: | 127-272 |
| Cow position: | chr8:44450138-44449987 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 131-272 |
| Cow position: | chr8:1297266-1297410 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 131-273 |
| Cow position: | chr8:53485456-53485605 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 132-276 |
| Cow position: | chr8:19430090-19429943 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 133-271 |
| Cow position: | chr8:11612299-11612444 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 135-283 |
| Cow position: | chr8:4559302-4559154 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 136 |
| Conread position: | 138-273 |
| Cow position: | chr8:54177835-54177971 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 145-283 |
| Cow position: | chr8:28509728-28509579 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.