Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-266 |
| Cow position: | chr9:7410198-7409930 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 10 |
| Conread position: | 1-272 |
| Cow position: | chr9:29184717-29184991 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 123 |
| Conread position: | 1-282 |
| Cow position: | chr9:42498248-42497961 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 87 |
| Conread position: | 1-283 |
| Cow position: | chr9:37017304-37017018 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 274 |
| Conread position: | 1-289 |
| Cow position: | chr9:26057033-26057315 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 13 |
| Conread position: | 3-293 |
| Cow position: | chr9:34355515-34355807 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 100 |
| Conread position: | 4-272 |
| Cow position: | chr9:5141490-5141223 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 167, 133 |
| Conread position: | 4-275 |
| Cow position: | chr9:49279868-49279613 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 4-276 |
| Cow position: | chr9:17410772-17411042 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-276 |
| Cow position: | chr9:34696879-34697159 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 160 |
| Conread position: | 4-283 |
| Cow position: | chr9:9443176-9443463 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 38 |
| Conread position: | 4-283 |
| Cow position: | chr9:9491206-9490925 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 4-283 |
| Cow position: | chr9:21888585-21888301 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 8 |
| Conread position: | 4-283 |
| Cow position: | chr9:30664366-30664649 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 4-283 |
| Cow position: | chr9:34000196-34000489 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 7 |
| Conread position: | 4-283 |
| Cow position: | chr9:42585213-42585491 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 19 |
| Conread position: | 4-283 |
| Cow position: | chr9:50080628-50080912 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 273 |
| Conread position: | 4-286 |
| Cow position: | chr9:22433526-22433802 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 4-286 |
| Cow position: | chr9:38961021-38961305 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 7 |
| Conread position: | 5-262 |
| Cow position: | chr9:28773533-28773273 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 5-275 |
| Cow position: | chr9:31124506-31124788 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 6-273 |
| Cow position: | chr9:23028215-23027939 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 165 |
| Conread position: | 14-273 |
| Cow position: | chr9:15805518-15805784 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 17-283 |
| Cow position: | chr9:54666306-54666037 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 10 |
| Conread position: | 19-282 |
| Cow position: | chr9:824358-824094 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 252 |
| Conread position: | 21-289 |
| Cow position: | chr9:2398232-2398501 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 251 |
| Conread position: | 50-283 |
| Cow position: | chr9:10092025-10092258 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 164, 29 |
| Conread position: | 51-286 |
| Cow position: | chr9:26404159-26403914 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 227 |
| Conread position: | 63-286 |
| Cow position: | chr9:43871330-43871108 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 148 |
| Conread position: | 90-280 |
| Cow position: | chr9:52484590-52484783 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 115-283 |
| Cow position: | chr9:10011108-10010936 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 125-284 |
| Cow position: | chr9:48118409-48118566 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 127-271 |
| Cow position: | chr9:36999767-36999918 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.