Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 10
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               113, 10
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               204, 22
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 282
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 102
               

               Conread position:
               2-266
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 146
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 100
               

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 104
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 83
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 113
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 112
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 282
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 262
               

               Conread position:
               5-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 96
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 77
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 33
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 155
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 268
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               10-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               192, 26
               

               Conread position:
               11-259
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               193, 62
               

               Conread position:
               11-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               195, 26
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               195, 14
               

               Conread position:
               12-283
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 107
               

               Conread position:
               12-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 66
               

               Conread position:
               14-281
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 23
               

               Conread position:
               14-286
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 152
               

               Conread position:
               15-283
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               18-262
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 148
               

               Conread position:
               18-283
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 99
               

               Conread position:
               28-276
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               30-281
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               40-286
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               174, 114
               

               Conread position:
               84-283
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               88-272
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               90-277
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 13
               

               Conread position:
               92-259
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               125-277
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               125-283
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               125-286
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               89, 165
               

               Conread position:
               125-289
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               127-283
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               131-286
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               133-283
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 143
               

               Conread position:
               138-283
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               139-262
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               144-273
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               144-279
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               70, 130
               
Show alignments to all cow chromosomes.