Cow genome map
| Conread name: | rret35_l19.y1 |
| Conread position: | 156-593 |
| Cow position: | chr11:21897798-21897370 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 173-575 |
| Cow position: | chr11:4033496-4033099 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 198 |
| Conread position: | 179-596 |
| Cow position: | chr11:9080641-9080229 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 179-596 |
| Cow position: | chr11:15994074-15994477 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 193-478 |
| Cow position: | chr11:9223403-9223116 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 259 |
| Conread position: | 193-574 |
| Cow position: | chr11:60823736-60824106 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 193-575 |
| Cow position: | chr11:37294155-37293787 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 193-593 |
| Cow position: | chr11:23415278-23414885 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 154 |
| Conread position: | 193-596 |
| Cow position: | chr11:1488190-1487795 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 162 |
| Conread position: | 193-596 |
| Cow position: | chr11:4025575-4025176 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 193-596 |
| Cow position: | chr11:7720465-7720080 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 172 |
| Conread position: | 193-596 |
| Cow position: | chr11:10092595-10092989 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 193-596 |
| Cow position: | chr11:10957746-10958136 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 193-596 |
| Cow position: | chr11:15126735-15127130 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 193-596 |
| Cow position: | chr11:30121718-30121330 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 193-596 |
| Cow position: | chr11:45106769-45107166 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 290 |
| Conread position: | 193-596 |
| Cow position: | chr11:76372141-76371744 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 111 |
| Conread position: | 198-596 |
| Cow position: | chr11:9155256-9154873 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 148 |
| Conread position: | 198-596 |
| Cow position: | chr11:24292381-24292770 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 198-596 |
| Cow position: | chr11:40774090-40773714 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 199-596 |
| Cow position: | chr11:71331428-71331818 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 155 |
| Conread position: | 204-596 |
| Cow position: | chr11:2834210-2834595 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 253 |
| Conread position: | 249-596 |
| Cow position: | chr11:9387841-9387513 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 265-427 |
| Cow position: | chr11:75740477-75740638 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 265-596 |
| Cow position: | chr11:35862638-35862313 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 241 |
| Conread position: | 315-597 |
| Cow position: | chr11:15720681-15720409 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 38 |
| Conread position: | 368-596 |
| Cow position: | chr11:34022073-34022293 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 415-597 |
| Cow position: | chr11:27937548-27937725 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 462-596 |
| Cow position: | chr11:33000079-33000208 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.