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Cow genome map

           
Conread name:
           
rsag029_a22.y1
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr13:2907248-2907121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr13:7104603-7104461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr13:52177549-52177408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:11260224-11260077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:26395410-26395259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:44201956-44201809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:55494577-55494719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:57446169-57446313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr13:56431875-56432034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr13:15195256-15195417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:16099172-16099348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr13:40483029-40483202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr13:55081091-55080916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr13:24094364-24094544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 154
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr13:34694062-34694240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr13:37069294-37069113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:10279875-10279691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:38035787-38035609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:20214389-20214204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr13:42203974-42203782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:2393335-2393146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:6861130-6860936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:45352980-45352789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:10924972-10925161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:42614033-42613851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:20271276-20271483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr13:20875969-20876095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr13:6486299-6486475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr13:29665969-29665795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr13:28587793-28587982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 154
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr13:6926464-6926312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr13:6663805-6663971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr13:17015180-17015337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr13:27180988-27180819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr13:8682402-8682231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr13:20174688-20174516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr13:52477700-52477873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
5-131
               

               
Cow position:
               
chr13:20666440-20666565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-132
               

               
Cow position:
               
chr13:43919315-43919446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-150
               

               
Cow position:
               
chr13:6974107-6973964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr13:13320743-13320598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr13:15083610-15083462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr13:19778907-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:9492717-9492576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:12673349-12673488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:18340479-18340330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:20217452-20217598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:20288284-20288138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:25926736-25926588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-154
               

               
Cow position:
               
chr13:10711469-10711616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-156
               

               
Cow position:
               
chr13:52057503-52057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
147, 70
               

               
Conread position:
               
5-157
               

               
Cow position:
               
chr13:8667565-8667410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-157
               

               
Cow position:
               
chr13:16834584-16834743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-157
               

               
Cow position:
               
chr13:18615330-18615167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr13:4404477-4404329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr13:16525277-16525436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr13:40541159-40541319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr13:10989124-10989285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr13:311384-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr13:1539187-1539024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 152
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:6980866-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:8637644-8637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:10522883-10522726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:12670505-12670666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:15192940-15193102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:34261177-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:52913819-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr13:47538214-47538364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr13:50646685-50646843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr13:6972329-6972165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:13533719-13533878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:16020797-16020643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:16163528-16163371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:21955119-21955286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:24715187-24715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:42672477-42672648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:53865582-53865417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr13:55775306-55775147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 28
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr13:18166678-18166513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr13:28376614-28376779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr13:42200565-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:15041527-15041694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:25520969-25521142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:54127881-54128049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr13:18215312-18215139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr13:40154784-40154959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 157
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr13:1147204-1147374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr13:11231348-11231517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr13:16038340-16038502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr13:56034913-56035077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr13:17158932-17159103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 149
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr13:21288139-21288307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:1462346-1462514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:6113580-6113754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:8699791-8699966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:14351528-14351356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:14544081-14543913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:14576159-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:14796155-14795984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:17823004-17823171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:19033504-19033334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:20473736-20473898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:20520261-20520088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:21171626-21171794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:21235725-21235891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
165, 75
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:23399712-23399544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:27198854-27198693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:47243605-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr13:49823973-49823803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr13:52055646-52055817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr13:23667199-23667035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr13:43576960-43576785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr13:5263335-5263504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr13:8362797-8362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr13:17611606-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 76
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr13:30148617-30148780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:9900104-9899921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:13196185-13196014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:16711295-16711120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:20534842-20534673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:28695806-28695633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr13:1339195-1339372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr13:54128650-54128825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr13:59170599-59170417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr13:3153696-3153517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr13:18197662-18197835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr13:20360225-20360046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr13:22046062-22046238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr13:53619950-53619771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr13:21242138-21242305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr13:22345328-22345504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr13:43811886-43811701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:10220907-10220725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:11410660-11410478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:19240375-19240209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
176, 34
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:20378374-20378547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:21246763-21246945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:24107602-24107778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:45499175-45499000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr13:54236753-54236581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:5659821-5659995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:14644997-14644820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
170, 70
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:15162686-15162865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:21194840-21195016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
161, 76
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:21981028-21981200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:37593000-37593177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:37775261-37775436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr13:50768545-50768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:6616813-6616994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:9707803-9707976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:13781126-13780943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:14063575-14063755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:17624268-17624088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:19279041-19278861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:25579244-25579428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr13:28439355-28439172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr13:19178124-19177936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr13:19883091-19883266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr13:41157351-41157165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr13:49356103-49356283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr13:26698552-26698729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr13:10986555-10986744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr13:34873535-34873350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr13:24230160-24229973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 146
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr13:32283074-32282887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 138
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr13:52641002-52641188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr13:60509174-60509360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr13:12923823-12923638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr13:13796865-13797055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr13:16476803-16476614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr13:17975017-17975199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr13:44003647-44003464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr13:18995072-18994886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 142
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr13:22729456-22729639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr13:47675989-47676172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 149
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr13:48127054-48126867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:6865719-6865904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:15288975-15289159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:16908163-16907974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 180
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:17813417-17813232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:21275805-21275618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:28605445-28605630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:33054427-33054612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr13:52459534-52459711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr13:11147003-11146812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr13:620303-620487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr13:12876029-12876213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr13:62008053-62007867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr13:32017566-32017761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr13:53850770-53850575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr13:9551307-9551125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr13:19223601-19223404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr13:23975221-23975411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr13:12449042-12449238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr13:24753833-24753646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr13:24796824-24796643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr13:3149485-3149681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr13:14411841-14411646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr13:29831485-29831673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 30
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr13:584924-585123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr13:15996980-15996789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr13:18999481-18999279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr13:8537768-8537570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr13:9124870-9124677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr13:21127391-21127595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr13:151909-151723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr13:52894093-52893900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr13:28536371-28536572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr13:3315729-3315943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr13:6951525-6951321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr13:9142225-9142012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr13:23685053-23685267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr13:55007826-55007983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
6-168
               

               
Cow position:
               
chr13:37946444-37946601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr13:9108730-9108889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr13:33854739-33854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr13:41806717-41806560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr13:5092449-5092614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr13:11565782-11565618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr13:7190909-7190746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr13:54627433-54627259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr13:31398404-31398232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
6-179
               

               
Cow position:
               
chr13:43342513-43342341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr13:20137766-20137590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr13:26316941-26317121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr13:10715808-10715630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr13:23823089-23823267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 43
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr13:62251899-62252076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 128
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr13:6189655-6189837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 77
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr13:20879879-20880063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
171, 147
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr13:38334931-38335119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr13:37614251-37614445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr13:51249435-51249629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
196, 108
               

               
Conread position:
               
7-152
               

               
Cow position:
               
chr13:26847884-26848031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr13:43787893-43788064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr13:43839732-43839903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chr13:15991286-15991459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
7-190
               

               
Cow position:
               
chr13:40491159-40490978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr13:5671642-5671848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
8-151
               

               
Cow position:
               
chr13:24155458-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
8-152
               

               
Cow position:
               
chr13:56958916-56958777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
9-166
               

               
Cow position:
               
chr13:48373376-48373529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
9-183
               

               
Cow position:
               
chr13:369181-369359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
9-183
               

               
Cow position:
               
chr13:26480262-26480432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
9-196
               

               
Cow position:
               
chr13:53847179-53847362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
168, 66
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr13:390698-390885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
10-147
               

               
Cow position:
               
chr13:1037580-1037442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr13:1568873-1568734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr13:22115619-22115462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
10-184
               

               
Cow position:
               
chr13:21170467-21170298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr13:18058309-18058481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr13:37554932-37555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr13:14782283-14782109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
11-152
               

               
Cow position:
               
chr13:19393232-19393096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr13:13775303-13775469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr13:20784530-20784373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
11-179
               

               
Cow position:
               
chr13:34532992-34533154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
11-189
               

               
Cow position:
               
chr13:57770046-57770221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr13:43102923-43102744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
12-152
               

               
Cow position:
               
chr13:25313210-25313349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr13:19222612-19222443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
13-174
               

               
Cow position:
               
chr13:10040622-10040778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr13:20854518-20854689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
13-188
               

               
Cow position:
               
chr13:7097524-7097351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
14-169
               

               
Cow position:
               
chr13:38396094-38395938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
14-182
               

               
Cow position:
               
chr13:15239574-15239742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chr13:15114407-15114233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
15-188
               

               
Cow position:
               
chr13:57986002-57986164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
15-192
               

               
Cow position:
               
chr13:20789581-20789754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
17-173
               

               
Cow position:
               
chr13:3387854-3388011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
17-183
               

               
Cow position:
               
chr13:46111903-46111735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
17-184
               

               
Cow position:
               
chr13:8367652-8367486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
17-186
               

               
Cow position:
               
chr13:15869048-15868876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr13:45593855-45593687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr13:2529016-2529194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
18-169
               

               
Cow position:
               
chr13:242568-242414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
19-166
               

               
Cow position:
               
chr13:20042328-20042477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr13:55327372-55327184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
21-192
               

               
Cow position:
               
chr13:41474802-41474637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
29-182
               

               
Cow position:
               
chr13:20820915-20821066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
34-193
               

               
Cow position:
               
chr13:21012887-21012725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
34-211
               

               
Cow position:
               
chr13:19182753-19182933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
35-166
               

               
Cow position:
               
chr13:43577907-43577774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
43-171
               

               
Cow position:
               
chr13:30809465-30809593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
46-201
               

               
Cow position:
               
chr13:8779161-8779007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
132, 37
               
Show alignments to all cow chromosomes.