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Cow genome map

           
Conread name:
           
rsag029_a22.y1
        

               
Conread position:
               
1-126
               

               
Cow position:
               
chr15:40562401-40562526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr15:14868487-14868643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr15:27063468-27063614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr15:32324151-32324305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr15:2931515-2931684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr15:39473878-39474049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:4138189-4138016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr15:37381681-37381505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
161, 90
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr15:4418347-4418525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr15:17100655-17100826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr15:25208704-25208882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr15:36457570-36457740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr15:9314779-9314600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:4295816-4295632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:26896641-26896827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr15:225751-225934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr15:39667959-39668142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr15:36649679-36649867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr15:26442268-26442079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr15:25201976-25201772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr15:20422725-20422898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr15:22443931-22444124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr15:15154353-15154158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr15:16928041-16928235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr15:27975818-27976024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr15:21941793-21941999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr15:36391727-36391544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr15:41049410-41049600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr15:21520201-21520022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr15:9465728-9465577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr15:22553490-22553638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr15:31637352-31637198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr15:19942644-19942487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr15:1857775-1857600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
164, 71
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr15:30956272-30956448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr15:20722935-20723109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
158, 78
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr15:36952152-36952326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr15:19950529-19950350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr15:33751054-33751195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr15:52432393-52432244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr15:8354091-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:12913448-12913596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:16230272-16230132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:16644736-16644885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:18703885-18704030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:21803607-21803762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:26903239-26903096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:38196029-38196174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr15:50552483-50552631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
5-155
               

               
Cow position:
               
chr15:1804285-1804433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr15:38860078-38860238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr15:4500753-4500589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:662418-662574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:5717760-5717609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:8715132-8715292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:12723139-12722974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:17621268-17621431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:20566181-20566018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:29810173-29810015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:31928846-31929008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr15:49483678-49483514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr15:44089113-44089276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:840098-840261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:11995977-11996141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:19002230-19002396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:20370405-20370567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:21903360-21903521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:22532302-22532140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:24124783-24124610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:30001744-30001583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr15:49230267-49230426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr15:12974389-12974219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr15:20290012-20290173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr15:794971-795133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr15:35577252-35577077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr15:4485204-4485029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr15:26158546-26158718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr15:26529940-26529778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:17084259-17084088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:17762959-17762790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:24031250-24031080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:29928016-29927843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:44119417-44119586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr15:47844043-47844207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr15:46563434-46563597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr15:28823769-28823934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr15:34223916-34223743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:10088369-10088196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:16112450-16112271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:17124418-17124592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:19771186-19771014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:20534400-20534576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:22939275-22939449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:26849487-26849656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:38883199-38883015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr15:44401899-44402073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr15:17233243-17233062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr15:13674139-13674309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr15:16603875-16603704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr15:30470922-30471104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr15:36643799-36643973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr15:33178376-33178552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr15:49491694-49491526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:848693-848518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:31495173-31495342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:40844570-40844750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:41475780-41475958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:43715376-43715201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr15:52791987-52791813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:6227132-6227302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:18762989-18763167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:21893829-21893651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:22531717-22531545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:27900460-27900634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:33643140-33642963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr15:40562632-40562809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr15:6905583-6905410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr15:19553874-19554053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr15:36353718-36353535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr15:43673894-43674075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr15:41527922-41528100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr15:36621447-36621267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr15:11908898-11909077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr15:25595478-25595662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
82, 100
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr15:26851180-26851358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr15:48095414-48095223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr15:4248198-4248011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
177, 148
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr15:7478946-7479135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr15:8665550-8665739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr15:27973167-27973340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr15:41624844-41625030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr15:12045487-12045678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr15:15177366-15177182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr15:28099162-28098971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr15:42380978-42380793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr15:48052554-48052734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr15:5691151-5690964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr15:5158424-5158231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr15:13846518-13846702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
159, 96
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr15:45574586-45574769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr15:37719542-37719724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr15:5408847-5409036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr15:39405793-39405603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr15:20487153-20487342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr15:7430020-7429825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 152
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr15:22938712-22938909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr15:21821874-21822073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr15:4919016-4919215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr15:37645041-37644842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr15:23798480-23798677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
160, 75
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr15:5523007-5522789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr15:28924705-28924906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr15:25358284-25358117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr15:5234948-5235110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr15:23572637-23572808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr15:36346833-36346669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr15:4284423-4284245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr15:37970855-37970675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr15:24616620-24616435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
67, 149
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr15:10199378-10199196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 9
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr15:16415346-16415156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr15:36435254-36435064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr15:44810118-44809921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr15:25696248-25696445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 149
               

               
Conread position:
               
7-151
               

               
Cow position:
               
chr15:244829-244686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr15:16657521-16657358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 149
               

               
Conread position:
               
7-175
               

               
Cow position:
               
chr15:36793446-36793610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
7-175
               

               
Cow position:
               
chr15:43626517-43626343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr15:38827276-38827436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr15:18942078-18941903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
7-192
               

               
Cow position:
               
chr15:36388339-36388168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
9-151
               

               
Cow position:
               
chr15:17196194-17196049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr15:34284364-34284533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr15:20856430-20856615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr15:11630057-11630232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr15:49274001-49273833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr15:43020585-43020776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 153
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr15:14760593-14760777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr15:12034641-12034841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
12-175
               

               
Cow position:
               
chr15:14988033-14987875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
12-175
               

               
Cow position:
               
chr15:50350892-50350724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr15:27657148-27656979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chr15:286521-286337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
13-171
               

               
Cow position:
               
chr15:6332422-6332579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr15:26380702-26380877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr15:2968379-2968200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr15:20566956-20566785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
15-168
               

               
Cow position:
               
chr15:38228177-38228023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
16-189
               

               
Cow position:
               
chr15:53005900-53006070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr15:43114681-43114860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
136, 76
               

               
Conread position:
               
17-152
               

               
Cow position:
               
chr15:85207-85343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
17-169
               

               
Cow position:
               
chr15:17371578-17371427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr15:45386-45564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
17-196
               

               
Cow position:
               
chr15:20905994-20906170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
163, 66
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr15:7026269-7026442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
22-192
               

               
Cow position:
               
chr15:47920117-47920285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
25-190
               

               
Cow position:
               
chr15:51831759-51831926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
29-166
               

               
Cow position:
               
chr15:19742487-19742347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
29-192
               

               
Cow position:
               
chr15:28206135-28205975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
30-199
               

               
Cow position:
               
chr15:11635437-11635278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
32-190
               

               
Cow position:
               
chr15:19403028-19402873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr15:36846163-36846325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
39-179
               

               
Cow position:
               
chr15:36539960-36539821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
39-190
               

               
Cow position:
               
chr15:16492471-16492321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
41-191
               

               
Cow position:
               
chr15:1284276-1284125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 113
               
Show alignments to all cow chromosomes.