Cow genome map

Conread name: rsag029_a22.y1

Conread position: 1-128
Cow position: chr21:9416350-9416476 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 66

Conread position: 1-152
Cow position: chr21:6998047-6998191 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 1-152
Cow position: chr21:14760665-14760807 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1-152
Cow position: chr21:30848841-30848698 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 1-169
Cow position: chr21:868824-868653 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 8

Conread position: 1-175
Cow position: chr21:31278283-31278459 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 8

Conread position: 1-182
Cow position: chr21:957772-957947 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 1-183
Cow position: chr21:40089669-40089482 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 86

Conread position: 1-184
Cow position: chr21:1511389-1511568 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 8

Conread position: 1-184
Cow position: chr21:20165739-20165919 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 6, 83

Conread position: 1-184
Cow position: chr21:31652483-31652667 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 155

Conread position: 1-190
Cow position: chr21:3430658-3430843 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 11

Conread position: 1-190
Cow position: chr21:47719199-47719018 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 1-191
Cow position: chr21:40589382-40589191 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 8

Conread position: 1-192
Cow position: chr21:26828874-26828687 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 8

Conread position: 1-192
Cow position: chr21:30031286-30031094 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 8

Conread position: 1-197
Cow position: chr21:40820753-40820559 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 9

Conread position: 1-200
Cow position: chr21:32297419-32297213 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 9

Conread position: 2-186
Cow position: chr21:15305199-15305011 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 79

Conread position: 2-187
Cow position: chr21:23535809-23535995 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 155

Conread position: 2-210
Cow position: chr21:34654173-34654376 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 3-182
Cow position: chr21:6713423-6713243 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 79

Conread position: 4-164
Cow position: chr21:11644864-11644704 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-174
Cow position: chr21:45446636-45446810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 153

Conread position: 4-175
Cow position: chr21:5344980-5345152 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 77

Conread position: 4-179
Cow position: chr21:28882283-28882458 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 149

Conread position: 4-185
Cow position: chr21:5214450-5214635 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 4-187
Cow position: chr21:44732942-44732759 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 150

Conread position: 4-188
Cow position: chr21:42144925-42145103 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 4-191
Cow position: chr21:22014292-22014477 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 138

Conread position: 4-191
Cow position: chr21:25344963-25345151 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 59

Conread position: 5-128
Cow position: chr21:7768541-7768661 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 5-128
Cow position: chr21:9590642-9590766 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 5-146
Cow position: chr21:7424911-7424769 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-151
Cow position: chr21:438665-438805 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 5-151
Cow position: chr21:3360913-3360767 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 70

Conread position: 5-151
Cow position: chr21:14516049-14516189 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 5-151
Cow position: chr21:30970038-30970184 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 121

Conread position: 5-151
Cow position: chr21:47465015-47464870 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 5-152
Cow position: chr21:7066279-7066135 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 30

Conread position: 5-152
Cow position: chr21:11779438-11779288 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 28

Conread position: 5-152
Cow position: chr21:18783366-18783216 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 5-152
Cow position: chr21:20160779-20160928 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 70

Conread position: 5-152
Cow position: chr21:29069223-29069073 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 5-152
Cow position: chr21:30835466-30835616 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 5-152
Cow position: chr21:32536499-32536641 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 5-152
Cow position: chr21:36508337-36508480 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 5-152
Cow position: chr21:37495843-37495694 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 102

Conread position: 5-152
Cow position: chr21:41287690-41287546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 58

Conread position: 5-152
Cow position: chr21:42017500-42017351 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 56

Conread position: 5-152
Cow position: chr21:43655805-43655952 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 48

Conread position: 5-153
Cow position: chr21:24875456-24875603 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-156
Cow position: chr21:8351190-8351040 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 5-159
Cow position: chr21:17193648-17193492 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 151

Conread position: 5-161
Cow position: chr21:16152544-16152698 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 5-162
Cow position: chr21:11353163-11353323 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 76

Conread position: 5-162
Cow position: chr21:22210143-22209984 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 151

Conread position: 5-162
Cow position: chr21:30231591-30231437 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 38

Conread position: 5-163
Cow position: chr21:2537036-2536876 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 151

Conread position: 5-163
Cow position: chr21:7460710-7460865 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 5-163
Cow position: chr21:29014808-29014657 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 5-164
Cow position: chr21:24797757-24797916 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 149

Conread position: 5-164
Cow position: chr21:24858418-24858577 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 148

Conread position: 5-166
Cow position: chr21:3585265-3585101 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 152

Conread position: 5-166
Cow position: chr21:13225818-13225980 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 114

Conread position: 5-166
Cow position: chr21:18341322-18341482 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 68

Conread position: 5-166
Cow position: chr21:28919420-28919268 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 5-166
Cow position: chr21:31659048-31658891 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-167
Cow position: chr21:10264136-10264299 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 51

Conread position: 5-167
Cow position: chr21:18568536-18568373 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 150

Conread position: 5-167
Cow position: chr21:20153059-20153221 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 52

Conread position: 5-167
Cow position: chr21:25012185-25012342 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 5-169
Cow position: chr21:6041887-6042055 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 153

Conread position: 5-169
Cow position: chr21:8986124-8986292 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 153

Conread position: 5-169
Cow position: chr21:11740016-11739855 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 26

Conread position: 5-169
Cow position: chr21:29418671-29418839 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 5-169
Cow position: chr21:32339637-32339479 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 5-169
Cow position: chr21:36763164-36763329 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 5-169
Cow position: chr21:41041047-41041214 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 152

Conread position: 5-172
Cow position: chr21:3177950-3178116 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 117

Conread position: 5-172
Cow position: chr21:13584958-13584784 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 157

Conread position: 5-172
Cow position: chr21:13588863-13589030 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 43

Conread position: 5-173
Cow position: chr21:641690-641854 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 5-173
Cow position: chr21:21940304-21940142 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-173
Cow position: chr21:40291644-40291480 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 5-174
Cow position: chr21:6051606-6051776 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 150

Conread position: 5-174
Cow position: chr21:23586985-23587144 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 5-174
Cow position: chr21:42680501-42680325 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 12

Conread position: 5-174
Cow position: chr21:46849025-46848861 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 158, 76

Conread position: 5-175
Cow position: chr21:745278-745442 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 5-175
Cow position: chr21:8506443-8506275 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 5-175
Cow position: chr21:8509331-8509163 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 5-175
Cow position: chr21:15271334-15271168 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 5-175
Cow position: chr21:16498619-16498792 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 149, 70

Conread position: 5-175
Cow position: chr21:17184020-17184190 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 149

Conread position: 5-175
Cow position: chr21:31279359-31279527 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 159, 75

Conread position: 5-175
Cow position: chr21:40266224-40266395 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 56

Conread position: 5-175
Cow position: chr21:41621228-41621401 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 38

Conread position: 5-176
Cow position: chr21:46809663-46809490 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 110

Conread position: 5-178
Cow position: chr21:6291849-6292024 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 151

Conread position: 5-178
Cow position: chr21:14452337-14452509 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 125

Conread position: 5-178
Cow position: chr21:19868852-19868687 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 5-178
Cow position: chr21:27744128-27744308 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 5-178
Cow position: chr21:27810490-27810666 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 153

Conread position: 5-178
Cow position: chr21:37706312-37706138 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 78, 151

Conread position: 5-179
Cow position: chr21:16796954-16797128 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 131

Conread position: 5-179
Cow position: chr21:42501153-42501326 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 148

Conread position: 5-179
Cow position: chr21:45376051-45376224 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 5-180
Cow position: chr21:24296665-24296488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 51

Conread position: 5-181
Cow position: chr21:18495324-18495495 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 149, 44

Conread position: 5-182
Cow position: chr21:6834152-6834331 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 149

Conread position: 5-182
Cow position: chr21:27567997-27568168 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 54

Conread position: 5-182
Cow position: chr21:27677583-27677760 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 151

Conread position: 5-182
Cow position: chr21:30222448-30222619 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 5-183
Cow position: chr21:82170-82339 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 5-183
Cow position: chr21:40930372-40930196 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-184
Cow position: chr21:2785390-2785220 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 5-184
Cow position: chr21:22718680-22718502 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 108, 10

Conread position: 5-184
Cow position: chr21:23980079-23979899 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 151

Conread position: 5-184
Cow position: chr21:27521236-27521061 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 172, 11

Conread position: 5-184
Cow position: chr21:30938563-30938386 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 94, 68

Conread position: 5-184
Cow position: chr21:38918301-38918482 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 152

Conread position: 5-184
Cow position: chr21:41738011-41738187 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 105

Conread position: 5-184
Cow position: chr21:47713905-47713729 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 54

Conread position: 5-184
Cow position: chr21:48334689-48334506 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 70

Conread position: 5-184
Cow position: chr21:49699937-49699757 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 153

Conread position: 5-186
Cow position: chr21:12322600-12322780 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 76

Conread position: 5-186
Cow position: chr21:27712140-27711950 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 82

Conread position: 5-186
Cow position: chr21:36682428-36682610 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 103, 70

Conread position: 5-186
Cow position: chr21:40475601-40475785 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 150

Conread position: 5-187
Cow position: chr21:42146249-42146429 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 51

Conread position: 5-188
Cow position: chr21:742380-742561 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 76

Conread position: 5-188
Cow position: chr21:42189653-42189475 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 5-188
Cow position: chr21:44724265-44724089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 27

Conread position: 5-189
Cow position: chr21:6851275-6851452 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 159, 69

Conread position: 5-190
Cow position: chr21:8523744-8523917 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 5-190
Cow position: chr21:30592206-30592029 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-191
Cow position: chr21:20174421-20174599 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 75

Conread position: 5-191
Cow position: chr21:20213674-20213483 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 154

Conread position: 5-192
Cow position: chr21:8430997-8430807 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 96, 68

Conread position: 5-192
Cow position: chr21:8545920-8545734 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 166

Conread position: 5-192
Cow position: chr21:27863410-27863226 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 158, 56

Conread position: 5-192
Cow position: chr21:42135513-42135330 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-193
Cow position: chr21:24757043-24757227 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-194
Cow position: chr21:12298697-12298876 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 5-194
Cow position: chr21:23672848-23673038 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 119

Conread position: 5-195
Cow position: chr21:15869793-15869979 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 68

Conread position: 5-195
Cow position: chr21:31462665-31462853 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 160, 76

Conread position: 5-196
Cow position: chr21:14247237-14247429 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 55

Conread position: 5-196
Cow position: chr21:37928752-37928942 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 131

Conread position: 5-196
Cow position: chr21:38720353-38720545 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 28

Conread position: 5-197
Cow position: chr21:15012542-15012724 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-197
Cow position: chr21:21772192-21772391 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 151

Conread position: 5-197
Cow position: chr21:29658379-29658565 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 26

Conread position: 5-197
Cow position: chr21:38482482-38482671 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 149

Conread position: 5-198
Cow position: chr21:10004782-10004593 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 70, 7

Conread position: 5-199
Cow position: chr21:646214-646019 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 51

Conread position: 5-200
Cow position: chr21:8359122-8358929 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 184, 70

Conread position: 5-201
Cow position: chr21:44251740-44251546 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 68

Conread position: 5-203
Cow position: chr21:42454963-42455162 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 174, 77

Conread position: 5-208
Cow position: chr21:3135766-3135558 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 79, 130

Conread position: 5-218
Cow position: chr21:20163811-20164025 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 173, 117

Conread position: 6-157
Cow position: chr21:24266462-24266306 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 6-166
Cow position: chr21:10817135-10817297 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 55

Conread position: 6-167
Cow position: chr21:17890406-17890567 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 148

Conread position: 6-169
Cow position: chr21:38449345-38449185 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 6-175
Cow position: chr21:4108879-4109049 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 103

Conread position: 6-179
Cow position: chr21:12154237-12154401 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 6-182
Cow position: chr21:44829655-44829477 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 150

Conread position: 6-183
Cow position: chr21:938123-938300 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 55

Conread position: 6-184
Cow position: chr21:13656532-13656352 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 36

Conread position: 6-187
Cow position: chr21:12348869-12349055 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 37

Conread position: 6-189
Cow position: chr21:39278193-39278007 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 53

Conread position: 6-195
Cow position: chr21:19196060-19195864 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 6-197
Cow position: chr21:11006667-11006472 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 56

Conread position: 6-198
Cow position: chr21:8713856-8713664 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 150

Conread position: 6-204
Cow position: chr21:26018483-26018682 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 28

Conread position: 7-174
Cow position: chr21:8240413-8240583 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 148

Conread position: 7-175
Cow position: chr21:45971069-45970908 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 7-184
Cow position: chr21:45537289-45537471 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 75

Conread position: 7-196
Cow position: chr21:27145887-27145691 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 29

Conread position: 8-192
Cow position: chr21:18449858-18450048 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 148

Conread position: 9-166
Cow position: chr21:13263460-13263619 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 50

Conread position: 9-184
Cow position: chr21:21907327-21907160 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 135, 84

Conread position: 9-201
Cow position: chr21:48482423-48482231 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 93

Conread position: 10-152
Cow position: chr21:31258574-31258719 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 65

Conread position: 10-161
Cow position: chr21:10410330-10410482 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 65

Conread position: 10-163
Cow position: chr21:28907439-28907289 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 73

Conread position: 10-174
Cow position: chr21:8426554-8426714 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 59

Conread position: 11-184
Cow position: chr21:5218818-5218987 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 12-167
Cow position: chr21:42920894-42920736 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 12

Conread position: 12-189
Cow position: chr21:31253643-31253820 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 71

Conread position: 12-198
Cow position: chr21:15444975-15444784 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 144

Conread position: 13-152
Cow position: chr21:16120050-16119912 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 120

Conread position: 13-175
Cow position: chr21:12473949-12473791 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 13-182
Cow position: chr21:19236859-19236689 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 7

Conread position: 14-167
Cow position: chr21:38943496-38943344 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 101

Conread position: 14-185
Cow position: chr21:29011861-29011692 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 38

Conread position: 15-152
Cow position: chr21:28237595-28237449 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 15-166
Cow position: chr21:17856878-17857028 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 41

Conread position: 15-186
Cow position: chr21:19340119-19339947 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 140

Conread position: 15-235
Cow position: chr21:40846621-40846850 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 97

Conread position: 16-160
Cow position: chr21:40916597-40916740 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 48

Conread position: 19-196
Cow position: chr21:30359228-30359057 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 158, 16

Conread position: 22-180
Cow position: chr21:46609884-46609726 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 130

Conread position: 29-168
Cow position: chr21:24350974-24351117 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 128

Conread position: 34-152
Cow position: chr21:37014296-37014175 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 39-182
Cow position: chr21:41829244-41829098 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 22

Show alignments to all cow chromosomes.