Cow genome map

Conread name: rsag029_a22.y1

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 8

Conread position: 1-152
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 9

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 9

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 74, 9

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 1-174
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 1-178
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 11

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 81

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 9

Conread position: 2-151
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 2-175
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 54

Conread position: 2-183
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 153

Conread position: 2-183
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 154

Conread position: 2-184
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 157

Conread position: 2-190
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 152

Conread position: 3-152
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 4-169
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 90

Conread position: 4-185
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 5-142
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 58

Conread position: 5-143
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 70

Conread position: 5-146
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 5-148
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 130

Conread position: 5-149
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 12

Conread position: 5-150
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 5-150
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 5-152
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 53

Conread position: 5-152
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 80

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 5-152
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 77

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 80

Conread position: 5-158
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 5-162
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 5-163
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 54

Conread position: 5-165
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 153

Conread position: 5-166
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-166
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 151

Conread position: 5-166
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 131

Conread position: 5-167
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 5-167
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 5-167
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 152

Conread position: 5-167
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 32

Conread position: 5-169
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 20

Conread position: 5-169
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 149

Conread position: 5-169
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 149

Conread position: 5-169
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-170
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 5-172
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 150

Conread position: 5-173
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 70

Conread position: 5-175
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 152

Conread position: 5-175
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 159

Conread position: 5-175
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 150

Conread position: 5-175
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 152

Conread position: 5-175
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 129

Conread position: 5-175
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 154

Conread position: 5-175
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 38

Conread position: 5-176
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 26

Conread position: 5-176
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 130

Conread position: 5-176
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 165, 70

Conread position: 5-177
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 160, 70

Conread position: 5-177
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 5-177
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 29

Conread position: 5-178
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 154

Conread position: 5-178
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 5-179
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 169, 76

Conread position: 5-179
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 70

Conread position: 5-179
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-179
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 163, 70

Conread position: 5-180
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 5-180
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 171, 29

Conread position: 5-180
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 5-181
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 151

Conread position: 5-182
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 5-183
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 151

Conread position: 5-183
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 130

Conread position: 5-183
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 5-183
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 151

Conread position: 5-184
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 150

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 90

Conread position: 5-184
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 17

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 43

Conread position: 5-184
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 5-184
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 167, 70

Conread position: 5-184
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 101

Conread position: 5-185
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 5-186
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 5-187
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 151

Conread position: 5-187
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 154

Conread position: 5-188
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 152

Conread position: 5-189
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 85

Conread position: 5-189
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 37

Conread position: 5-190
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 5-190
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 150

Conread position: 5-190
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 148, 0

Conread position: 5-191
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 148, 0

Conread position: 5-192
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 5-192
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 77

Conread position: 5-192
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 165, 68

Conread position: 5-192
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 15

Conread position: 5-193
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 70, 130

Conread position: 5-193
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 5-195
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 132

Conread position: 5-195
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 5-195
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 152

Conread position: 5-195
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 29

Conread position: 5-195
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 29

Conread position: 5-196
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 119

Conread position: 5-197
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 5-198
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 27

Conread position: 5-200
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 63

Conread position: 5-200
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 161

Conread position: 5-201
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 70

Conread position: 5-201
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 76

Conread position: 5-201
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 154

Conread position: 6-149
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 6-174
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 6-177
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 11

Conread position: 6-178
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 55

Conread position: 6-192
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 150

Conread position: 6-192
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 30

Conread position: 7-152
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 8-128
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 8-184
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 26, 75

Conread position: 9-181
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 9-184
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 10-135
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 10-151
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 10-175
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 79

Conread position: 10-182
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 125

Conread position: 10-184
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 144

Conread position: 11-179
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 154, 142

Conread position: 11-192
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 149

Conread position: 13-175
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 141

Conread position: 13-183
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 151, 86

Conread position: 14-182
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 15-192
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 19-175
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 135

Conread position: 20-175
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 115

Conread position: 29-178
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 56

Conread position: 61-185
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.