Cow genome map

Conread name: rsag029_a22.y1

Conread position: 1-128
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 44

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 11

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 1-179
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 11

Conread position: 1-179
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 8

Conread position: 1-181
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 11

Conread position: 1-184
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 55

Conread position: 1-184
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 82

Conread position: 1-184
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 8

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 82

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 186, 9

Conread position: 2-185
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 2-190
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 2-196
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 133

Conread position: 3-152
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 7

Conread position: 3-179
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 154

Conread position: 4-146
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 11

Conread position: 4-185
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 168

Conread position: 4-192
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 5-130
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 5-134
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 5-135
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-148
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 133

Conread position: 5-150
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 40

Conread position: 5-152
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 70

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 5-152
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 144

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-152
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 5-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 149

Conread position: 5-162
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 15

Conread position: 5-163
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 42

Conread position: 5-165
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 151

Conread position: 5-165
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 150

Conread position: 5-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 70

Conread position: 5-166
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 5-166
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 150

Conread position: 5-168
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 26

Conread position: 5-169
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 5-169
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 89

Conread position: 5-173
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 151

Conread position: 5-174
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 5-175
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 56

Conread position: 5-175
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 5-175
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 130

Conread position: 5-175
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 159

Conread position: 5-179
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 18

Conread position: 5-179
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 151

Conread position: 5-179
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 5-180
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 164, 7

Conread position: 5-183
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 70

Conread position: 5-184
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 156

Conread position: 5-184
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 151

Conread position: 5-184
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 157, 70

Conread position: 5-184
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 55

Conread position: 5-184
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 81

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 60

Conread position: 5-184
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 149

Conread position: 5-185
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 68

Conread position: 5-185
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 138

Conread position: 5-185
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 68

Conread position: 5-186
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 158, 33

Conread position: 5-187
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 5-187
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 167

Conread position: 5-188
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 68, 151

Conread position: 5-189
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 70

Conread position: 5-189
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 81

Conread position: 5-190
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 177, 43

Conread position: 5-190
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 149

Conread position: 5-191
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 151

Conread position: 5-191
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 75

Conread position: 5-191
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 63

Conread position: 5-191
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 151

Conread position: 5-192
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 5-192
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 5-193
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 10

Conread position: 5-194
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 128

Conread position: 5-196
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 5-196
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 153

Conread position: 5-197
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 78

Conread position: 5-198
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 5-200
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 70

Conread position: 5-213
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 151

Conread position: 6-151
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 77

Conread position: 6-152
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 78

Conread position: 6-169
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 67

Conread position: 6-188
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 160, 69

Conread position: 6-189
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 38

Conread position: 6-192
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 6-196
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 185, 69

Conread position: 6-201
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 150

Conread position: 7-152
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 7-175
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 45

Conread position: 7-195
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 7-200
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 54

Conread position: 8-151
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 28

Conread position: 8-189
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 9-178
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 72, 25

Conread position: 10-152
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 26

Conread position: 10-166
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 51

Conread position: 11-152
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 11-152
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 11-167
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 53

Conread position: 11-184
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 158, 64

Conread position: 11-184
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 115

Conread position: 11-200
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 12-165
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 73

Conread position: 12-183
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 13-169
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 60

Conread position: 13-180
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 62

Conread position: 14-183
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 68

Conread position: 18-171
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 142

Conread position: 18-175
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 41

Conread position: 18-192
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 30

Conread position: 29-184
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 130

Conread position: 46-189
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 15

Show alignments to all cow chromosomes.