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Cow genome map

           
Conread name:
           
rsag029_a22.y1
        

               
Conread position:
               
1-150
               

               
Cow position:
               
chr28:16569846-16569993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr28:26743667-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr28:21868498-21868663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr28:4182041-4182208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr28:5805708-5805873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:6283451-6283274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:26530825-26530647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr28:3484621-3484812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr28:19038978-19038788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr28:24651565-24651385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:21118717-21118906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:24966427-24966619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr28:16919127-16918944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr28:26820238-26820044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:4027422-4027235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
194, 11
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:6091403-6091589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:6563857-6563664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:17738112-17737911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr28:2777571-2777741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr28:29989069-29988883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr28:16386475-16386358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr28:8827203-8827387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr28:27445530-27445356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr28:4866530-4866348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
165, 71
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr28:17620318-17620132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr28:16252362-16252177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
5-122
               

               
Cow position:
               
chr28:8167310-8167192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-123
               

               
Cow position:
               
chr28:24726393-24726278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr28:8516139-8516000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr28:20397326-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr28:4045888-4046035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr28:13474344-13474490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr28:20968536-20968385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr28:3746246-3746400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr28:4074013-4074180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 156
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr28:4185950-4186106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:4364781-4364619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
155, 131
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:5609873-5609714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:7008934-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:8936194-8936352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:24996569-24996414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr28:30902170-30902325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr28:19262543-19262379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr28:4013128-4013290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr28:12973925-12974093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr28:26960865-26960706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr28:8656122-8655956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr28:10762938-10763097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr28:11346443-11346280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr28:13527238-13527407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr28:2151396-2151230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr28:3492740-3492577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr28:12951461-12951626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr28:11411490-11411328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr28:8681386-8681225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr28:8787584-8787751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr28:9109260-9109422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:118653-118826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:3143834-3143672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:4022717-4022883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:4643726-4643557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:7132046-7131877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:7557690-7557513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:10958846-10959012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr28:11562202-11562032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr28:4090014-4089846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr28:5231982-5232156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
138, 150
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr28:29850771-29850606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr28:4077302-4077120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr28:5144477-5144297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr28:4881196-4881032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr28:11585158-11584991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr28:13371103-13370920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr28:3445437-3445260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:3423821-3424001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
163, 148
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:4884212-4884032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:10606590-10606419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:11307474-11307300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:18797364-18797530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:22085498-22085323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr28:23296366-23296539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr28:2279552-2279381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr28:9705694-9705881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr28:13245605-13245784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr28:34230272-34230455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr28:8358941-8359123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr28:8716344-8716152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr28:11422772-11422594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr28:5673919-5674097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr28:11398753-11398568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:5437041-5436860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:7964634-7964449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
159, 148
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:9677713-9677889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:11827729-11827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:13356328-13356138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:16879617-16879799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
160, 77
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:17949069-17948889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr28:20281802-20281978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
171, 32
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:9426306-9426124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:10053281-10053107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:14998111-14998294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:15362623-15362810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:21008621-21008446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:21744759-21744938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr28:3449347-3449534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr28:3678406-3678585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr28:11866621-11866444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr28:31223517-31223328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:2077544-2077729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:4163539-4163355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:5235925-5236106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:5402999-5402815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:5630142-5630325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:7350698-7350880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:10615902-10615724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:11305589-11305400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:19128125-19127940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr28:26982694-26982503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr28:8347775-8347965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:117719-117528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:659251-659056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:2819819-2819998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:3137587-3137788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:17680666-17680857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 151
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:21207324-21207144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr28:22332572-22332767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr28:6358370-6358177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 152
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr28:8304291-8304482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr28:7697938-7697743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr28:28765859-28765668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr28:24698734-24698933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr28:26868107-26867913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
170, 77
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr28:29500444-29500647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr28:19216865-19217055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr28:2892296-2892508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
101, 152
               

               
Conread position:
               
6-151
               

               
Cow position:
               
chr28:5188384-5188240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
6-162
               

               
Cow position:
               
chr28:24082315-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
6-166
               

               
Cow position:
               
chr28:4282446-4282285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr28:19564183-19564027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr28:21845002-21845168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr28:4307852-4307673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 151
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr28:5254919-5255094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
165, 69
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr28:5199869-5200047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr28:18791083-18791253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr28:6301126-6301314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr28:6321862-6322053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr28:32014829-32015021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
7-152
               

               
Cow position:
               
chr28:18608322-18608174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
7-174
               

               
Cow position:
               
chr28:3726163-3725996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 147
               

               
Conread position:
               
7-179
               

               
Cow position:
               
chr28:5817888-5818054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
7-181
               

               
Cow position:
               
chr28:13048238-13048057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
7-184
               

               
Cow position:
               
chr28:11059546-11059715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
161, 41
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr28:16200697-16200512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
7-196
               

               
Cow position:
               
chr28:26826265-26826458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr28:10252871-10252678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 148
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr28:10495253-10495067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr28:21103780-21103572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr28:19994901-19994724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 147
               

               
Conread position:
               
10-183
               

               
Cow position:
               
chr28:4937193-4937017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 146
               

               
Conread position:
               
10-185
               

               
Cow position:
               
chr28:9636408-9636234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
11-171
               

               
Cow position:
               
chr28:24238427-24238275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
11-180
               

               
Cow position:
               
chr28:26304113-26304284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
11-182
               

               
Cow position:
               
chr28:11828912-11828739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
12-171
               

               
Cow position:
               
chr28:3011220-3011056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr28:30293538-30293361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
13-166
               

               
Cow position:
               
chr28:4588370-4588518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
13-171
               

               
Cow position:
               
chr28:21263209-21263364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
13-193
               

               
Cow position:
               
chr28:16159819-16159636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr28:18770132-18770322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
14-178
               

               
Cow position:
               
chr28:14657766-14657935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
15-150
               

               
Cow position:
               
chr28:18369962-18369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
15-169
               

               
Cow position:
               
chr28:5441844-5441689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
15-175
               

               
Cow position:
               
chr28:12448283-12448433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
17-188
               

               
Cow position:
               
chr28:13174500-13174328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chr28:3311168-3310990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr28:24767460-24767643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
19-152
               

               
Cow position:
               
chr28:22183083-22182942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
22-175
               

               
Cow position:
               
chr28:8165155-8164999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
32-190
               

               
Cow position:
               
chr28:22170209-22170057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
34-169
               

               
Cow position:
               
chr28:18740419-18740287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 34
               
Show alignments to all cow chromosomes.