Cow genome map
| Conread name: | rsag034_i21.y1 |
| Conread position: | 2-201 |
| Cow position: | chr12:30805511-30805717 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 2-201 |
| Cow position: | chr12:45820704-45820496 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 19-200 |
| Cow position: | chr12:17031294-17031477 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 24-201 |
| Cow position: | chr12:6411054-6410869 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 30-201 |
| Cow position: | chr12:40110070-40110249 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 10 |
| Conread position: | 30-201 |
| Cow position: | chr12:41159277-41159458 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 34-188 |
| Cow position: | chr12:18769391-18769224 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 37-200 |
| Cow position: | chr12:6687555-6687724 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 39-201 |
| Cow position: | chr12:18577540-18577709 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 40-201 |
| Cow position: | chr12:6210468-6210294 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 42-200 |
| Cow position: | chr12:19869164-19869331 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 42-201 |
| Cow position: | chr12:30170358-30170531 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 42-201 |
| Cow position: | chr12:44622052-44622217 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 43-201 |
| Cow position: | chr12:17881566-17881725 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 43-201 |
| Cow position: | chr12:31228273-31228437 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 43-201 |
| Cow position: | chr12:34148657-34148486 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 43-201 |
| Cow position: | chr12:40307390-40307561 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 43-201 |
| Cow position: | chr12:42966695-42966861 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 43-203 |
| Cow position: | chr12:34673635-34673476 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 43-203 |
| Cow position: | chr12:35368335-35368506 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 43-203 |
| Cow position: | chr12:39486124-39486298 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 45-185 |
| Cow position: | chr12:15938573-15938427 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 45-185 |
| Cow position: | chr12:31429862-31429723 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 45-194 |
| Cow position: | chr12:4342027-4341867 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 45-194 |
| Cow position: | chr12:37481436-37481286 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-200 |
| Cow position: | chr12:7884961-7884808 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 45-201 |
| Cow position: | chr12:15122036-15122183 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 45-203 |
| Cow position: | chr12:19691541-19691369 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 46-193 |
| Cow position: | chr12:6489279-6489129 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 46-199 |
| Cow position: | chr12:26777455-26777293 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 46-201 |
| Cow position: | chr12:4116202-4116356 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 46-201 |
| Cow position: | chr12:18421229-18421060 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 47-199 |
| Cow position: | chr12:18123385-18123547 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 48-200 |
| Cow position: | chr12:21486293-21486446 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 54-187 |
| Cow position: | chr12:40270382-40270244 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 54-201 |
| Cow position: | chr12:5905761-5905917 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 54-201 |
| Cow position: | chr12:11835946-11836096 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 54-201 |
| Cow position: | chr12:29694333-29694183 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 54-202 |
| Cow position: | chr12:16605942-16605788 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 55-201 |
| Cow position: | chr12:18518376-18518530 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 56-203 |
| Cow position: | chr12:25805404-25805245 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 62-201 |
| Cow position: | chr12:34473902-34473761 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 6 |
| Conread position: | 66-203 |
| Cow position: | chr12:18388566-18388417 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 72-201 |
| Cow position: | chr12:42879429-42879558 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 9 |
Show alignments to all cow chromosomes.