Cow genome map

Conread name: rsag034_i21.y1

Conread position: 1-200
Cow position: chr15:37931374-37931573 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 142, 28

Conread position: 13-200
Cow position: chr15:11658177-11658380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 14

Conread position: 19-201
Cow position: chr15:11011227-11011417 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 20

Conread position: 19-201
Cow position: chr15:16823317-16823125 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 21

Conread position: 21-197
Cow position: chr15:6657485-6657299 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 18

Conread position: 23-200
Cow position: chr15:36781960-36782139 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 15

Conread position: 27-201
Cow position: chr15:14020845-14020660 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 13

Conread position: 27-201
Cow position: chr15:24994154-24994333 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 13

Conread position: 31-201
Cow position: chr15:31085902-31085723 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 9

Conread position: 35-185
Cow position: chr15:12316288-12316128 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 106, 5

Conread position: 39-200
Cow position: chr15:16476381-16476560 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 39-200
Cow position: chr15:24044735-24044910 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 39-201
Cow position: chr15:11362821-11362990 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 16

Conread position: 39-201
Cow position: chr15:46868349-46868524 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 42-188
Cow position: chr15:10615383-10615536 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 15

Conread position: 42-199
Cow position: chr15:40009290-40009461 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 42-200
Cow position: chr15:1329743-1329914 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 13

Conread position: 42-200
Cow position: chr15:6970342-6970171 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 11

Conread position: 43-200
Cow position: chr15:20370110-20370268 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 96, 15

Conread position: 43-200
Cow position: chr15:26079013-26079175 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 12

Conread position: 43-201
Cow position: chr15:5234648-5234816 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 12

Conread position: 43-201
Cow position: chr15:13669547-13669715 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 12

Conread position: 43-201
Cow position: chr15:14505784-14505613 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 12

Conread position: 43-201
Cow position: chr15:16583355-16583518 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 12

Conread position: 43-201
Cow position: chr15:26404626-26404462 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 12

Conread position: 43-201
Cow position: chr15:28039109-28038944 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 15

Conread position: 43-201
Cow position: chr15:33976336-33976501 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 12

Conread position: 43-201
Cow position: chr15:34104623-34104458 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 12

Conread position: 43-201
Cow position: chr15:34206840-34207001 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 12

Conread position: 43-201
Cow position: chr15:38846453-38846289 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 103, 12

Conread position: 43-202
Cow position: chr15:14871106-14870929 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 44-201
Cow position: chr15:33605277-33605110 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 11

Conread position: 45-188
Cow position: chr15:9177857-9178009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 10

Conread position: 45-200
Cow position: chr15:15707764-15707922 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 46

Conread position: 45-201
Cow position: chr15:16616551-16616387 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 45-203
Cow position: chr15:23775604-23775765 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 73

Conread position: 46-200
Cow position: chr15:26896358-26896526 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 9

Conread position: 46-201
Cow position: chr15:33306463-33306297 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 46

Conread position: 46-203
Cow position: chr15:24038056-24038215 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 9

Conread position: 47-201
Cow position: chr15:10336104-10335944 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 8

Conread position: 48-200
Cow position: chr15:30982272-30982113 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 70

Conread position: 48-201
Cow position: chr15:23703127-23702962 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 126

Conread position: 48-203
Cow position: chr15:17869940-17870100 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 48-203
Cow position: chr15:52197962-52198122 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 9

Conread position: 49-189
Cow position: chr15:9648377-9648505 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 6

Conread position: 56-201
Cow position: chr15:41583255-41583098 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 57-201
Cow position: chr15:16543120-16543270 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 65-201
Cow position: chr15:47822135-47821997 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 31

Conread position: 67-185
Cow position: chr15:16936524-16936637 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 67-201
Cow position: chr15:26158284-26158429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 14

Conread position: 74-203
Cow position: chr15:17763226-17763093 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 7

Show alignments to all cow chromosomes.