Cow genome map
Conread name: | rsag034_i21.y1 |
Conread position: | 2-181 |
Cow position: | chr16:48145713-48145526 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 38, 165 |
Conread position: | 13-201 |
Cow position: | chr16:14242074-14242273 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 15, 5 |
Conread position: | 29-201 |
Cow position: | chr16:41752854-41752671 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 114, 11 |
Conread position: | 35-200 |
Cow position: | chr16:18205694-18205861 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 20, 5 |
Conread position: | 35-201 |
Cow position: | chr16:53086602-53086428 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 20, 47 |
Conread position: | 39-194 |
Cow position: | chr16:7256282-7256433 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 104, 16 |
Conread position: | 40-201 |
Cow position: | chr16:52889683-52889507 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 136 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 42-199 |
Cow position: | chr16:48370215-48370048 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 99, 13 |
Conread position: | 42-201 |
Cow position: | chr16:590178-590015 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 42-201 |
Cow position: | chr16:819982-820150 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 135 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 99, 13 |
Conread position: | 42-201 |
Cow position: | chr16:15188929-15189086 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 131 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 123, 13 |
Conread position: | 43-185 |
Cow position: | chr16:4712633-4712785 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 105, 12 |
Conread position: | 43-194 |
Cow position: | chr16:39474406-39474243 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 86, 12 |
Conread position: | 43-201 |
Cow position: | chr16:5293395-5293565 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 135 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 43-201 |
Cow position: | chr16:15408140-15407978 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 43-201 |
Cow position: | chr16:15726629-15726466 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 86, 12 |
Conread position: | 43-201 |
Cow position: | chr16:28833574-28833740 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 130 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 86, 14 |
Conread position: | 43-201 |
Cow position: | chr16:33507795-33507968 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 138 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 43-201 |
Cow position: | chr16:49141826-49141663 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 101, 12 |
Conread position: | 43-203 |
Cow position: | chr16:7504832-7504991 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 121, 12 |
Conread position: | 43-203 |
Cow position: | chr16:28922521-28922689 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 133 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 83, 12 |
Conread position: | 44-201 |
Cow position: | chr16:49230040-49229871 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 44, 11 |
Conread position: | 44-203 |
Cow position: | chr16:5256736-5256903 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 66, 11 |
Conread position: | 44-203 |
Cow position: | chr16:8315442-8315281 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 101, 37 |
Conread position: | 45-199 |
Cow position: | chr16:43275754-43275921 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 45-200 |
Cow position: | chr16:4857358-4857195 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 45-203 |
Cow position: | chr16:39616476-39616645 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 10, 39 |
Conread position: | 46-186 |
Cow position: | chr16:23033604-23033745 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 122 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 114, 9 |
Conread position: | 46-194 |
Cow position: | chr16:48956538-48956689 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 127 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 91, 9 |
Conread position: | 46-200 |
Cow position: | chr16:7498804-7498961 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 46-201 |
Cow position: | chr16:4059094-4059256 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 94, 9 |
Conread position: | 46-201 |
Cow position: | chr16:18402429-18402586 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 124 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 46-203 |
Cow position: | chr16:14106381-14106549 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 46-203 |
Cow position: | chr16:28191802-28191972 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 46-203 |
Cow position: | chr16:38709091-38708927 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 46-203 |
Cow position: | chr16:42092641-42092480 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 136 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 94, 9 |
Conread position: | 47-201 |
Cow position: | chr16:48398509-48398350 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 96, 11 |
Conread position: | 47-201 |
Cow position: | chr16:53627689-53627526 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 47-203 |
Cow position: | chr16:24147891-24148061 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 94, 8 |
Conread position: | 47-203 |
Cow position: | chr16:50417954-50417780 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 48-201 |
Cow position: | chr16:49169647-49169484 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 7, 34 |
Conread position: | 48-203 |
Cow position: | chr16:33226797-33226635 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 52-200 |
Cow position: | chr16:26373211-26373051 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 54-201 |
Cow position: | chr16:4699227-4699079 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 89, 27 |
Conread position: | 54-201 |
Cow position: | chr16:49125778-49125627 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 87, 29 |
Conread position: | 54-203 |
Cow position: | chr16:56231565-56231730 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 55-203 |
Cow position: | chr16:13195590-13195438 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 55-203 |
Cow position: | chr16:51598859-51598702 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 88, 26 |
Conread position: | 57-201 |
Cow position: | chr16:19408768-19408615 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 57-203 |
Cow position: | chr16:11615483-11615329 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 60-201 |
Cow position: | chr16:46353826-46353685 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 102, 112 |
Conread position: | 87-201 |
Cow position: | chr16:50288932-50289051 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.