Cow genome map

Conread name: rsag034_i21.y1

Conread position: 2-181
Cow position: chr16:48145713-48145526 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 165

Conread position: 13-201
Cow position: chr16:14242074-14242273 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 5

Conread position: 29-201
Cow position: chr16:41752854-41752671 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 11

Conread position: 35-200
Cow position: chr16:18205694-18205861 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 20, 5

Conread position: 35-201
Cow position: chr16:53086602-53086428 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 47

Conread position: 39-194
Cow position: chr16:7256282-7256433 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 16

Conread position: 40-201
Cow position: chr16:52889683-52889507 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 42-199
Cow position: chr16:48370215-48370048 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 13

Conread position: 42-201
Cow position: chr16:590178-590015 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 101, 13

Conread position: 42-201
Cow position: chr16:819982-820150 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 13

Conread position: 42-201
Cow position: chr16:15188929-15189086 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 123, 13

Conread position: 43-185
Cow position: chr16:4712633-4712785 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 12

Conread position: 43-194
Cow position: chr16:39474406-39474243 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 12

Conread position: 43-201
Cow position: chr16:5293395-5293565 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 96, 12

Conread position: 43-201
Cow position: chr16:15408140-15407978 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 12

Conread position: 43-201
Cow position: chr16:15726629-15726466 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 12

Conread position: 43-201
Cow position: chr16:28833574-28833740 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 14

Conread position: 43-201
Cow position: chr16:33507795-33507968 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 12

Conread position: 43-201
Cow position: chr16:49141826-49141663 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 101, 12

Conread position: 43-203
Cow position: chr16:7504832-7504991 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 12

Conread position: 43-203
Cow position: chr16:28922521-28922689 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 12

Conread position: 44-201
Cow position: chr16:49230040-49229871 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 11

Conread position: 44-203
Cow position: chr16:5256736-5256903 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 11

Conread position: 44-203
Cow position: chr16:8315442-8315281 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 37

Conread position: 45-199
Cow position: chr16:43275754-43275921 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 45-200
Cow position: chr16:4857358-4857195 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 45-203
Cow position: chr16:39616476-39616645 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 39

Conread position: 46-186
Cow position: chr16:23033604-23033745 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 114, 9

Conread position: 46-194
Cow position: chr16:48956538-48956689 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 9

Conread position: 46-200
Cow position: chr16:7498804-7498961 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 9

Conread position: 46-201
Cow position: chr16:4059094-4059256 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 9

Conread position: 46-201
Cow position: chr16:18402429-18402586 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 46-203
Cow position: chr16:14106381-14106549 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 9

Conread position: 46-203
Cow position: chr16:28191802-28191972 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 11

Conread position: 46-203
Cow position: chr16:38709091-38708927 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 9

Conread position: 46-203
Cow position: chr16:42092641-42092480 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 9

Conread position: 47-201
Cow position: chr16:48398509-48398350 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 11

Conread position: 47-201
Cow position: chr16:53627689-53627526 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 47-203
Cow position: chr16:24147891-24148061 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 8

Conread position: 47-203
Cow position: chr16:50417954-50417780 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 48-201
Cow position: chr16:49169647-49169484 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 34

Conread position: 48-203
Cow position: chr16:33226797-33226635 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 52-200
Cow position: chr16:26373211-26373051 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 54-201
Cow position: chr16:4699227-4699079 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 27

Conread position: 54-201
Cow position: chr16:49125778-49125627 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 29

Conread position: 54-203
Cow position: chr16:56231565-56231730 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 55-203
Cow position: chr16:13195590-13195438 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 55-203
Cow position: chr16:51598859-51598702 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 26

Conread position: 57-201
Cow position: chr16:19408768-19408615 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 57-203
Cow position: chr16:11615483-11615329 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 60-201
Cow position: chr16:46353826-46353685 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 112

Conread position: 87-201
Cow position: chr16:50288932-50289051 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.