Cow genome map
| Conread name: | rsag034_i21.y1 |
| Conread position: | 9-200 |
| Cow position: | chr20:8556532-8556327 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 17-201 |
| Cow position: | chr20:14572608-14572415 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 21-201 |
| Cow position: | chr20:13465270-13465457 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 26-201 |
| Cow position: | chr20:7442365-7442183 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 27-199 |
| Cow position: | chr20:12420863-12420676 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 27-201 |
| Cow position: | chr20:14735435-14735620 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 35-201 |
| Cow position: | chr20:27339834-27340009 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 35-203 |
| Cow position: | chr20:5998899-5998722 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 39-200 |
| Cow position: | chr20:33363291-33363460 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 39-201 |
| Cow position: | chr20:1140004-1139831 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 39-201 |
| Cow position: | chr20:35364821-35364990 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 41-201 |
| Cow position: | chr20:10200114-10200292 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 42-184 |
| Cow position: | chr20:31147870-31148014 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 42-201 |
| Cow position: | chr20:19459870-19459717 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 42-203 |
| Cow position: | chr20:11550140-11550312 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 43-184 |
| Cow position: | chr20:4945470-4945322 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 43-185 |
| Cow position: | chr20:18185354-18185497 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 43-188 |
| Cow position: | chr20:26076860-26077015 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 43-200 |
| Cow position: | chr20:21019340-21019507 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 43-201 |
| Cow position: | chr20:8703131-8702965 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 43-201 |
| Cow position: | chr20:10235627-10235800 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 43-201 |
| Cow position: | chr20:20312962-20312802 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 43-202 |
| Cow position: | chr20:10208579-10208751 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 43-203 |
| Cow position: | chr20:3607176-3607010 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 43-203 |
| Cow position: | chr20:24069590-24069750 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 44-201 |
| Cow position: | chr20:32847126-32847300 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 44-203 |
| Cow position: | chr20:22235090-22235261 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 45-200 |
| Cow position: | chr20:14806659-14806829 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 45-203 |
| Cow position: | chr20:13269400-13269573 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-203 |
| Cow position: | chr20:15549122-15548950 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 46-197 |
| Cow position: | chr20:4893119-4892961 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 46-199 |
| Cow position: | chr20:12582169-12582008 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 46-201 |
| Cow position: | chr20:5104656-5104496 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 46-201 |
| Cow position: | chr20:11923463-11923298 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 46-202 |
| Cow position: | chr20:31746847-31746683 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 46-203 |
| Cow position: | chr20:20202994-20203162 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 47-203 |
| Cow position: | chr20:6096706-6096547 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 48-199 |
| Cow position: | chr20:39517791-39517949 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 48-203 |
| Cow position: | chr20:6258283-6258114 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 54-193 |
| Cow position: | chr20:18618424-18618572 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 54-201 |
| Cow position: | chr20:13752026-13752184 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 54-203 |
| Cow position: | chr20:38768668-38768510 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 55-201 |
| Cow position: | chr20:3781641-3781482 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 56-199 |
| Cow position: | chr20:22850949-22851096 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 59-201 |
| Cow position: | chr20:20983797-20983941 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 71-203 |
| Cow position: | chr20:11043695-11043556 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.