Cow genome map
Conread name: | rsag034_i21.y1 |
Conread position: | 1-201 |
Cow position: | chr21:13585302-13585104 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 5-201 |
Cow position: | chr21:12801989-12801782 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 23, 5 |
Conread position: | 8-200 |
Cow position: | chr21:29484743-29484943 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 19, 32 |
Conread position: | 11-201 |
Cow position: | chr21:6051271-6051472 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 44, 5 |
Conread position: | 28-200 |
Cow position: | chr21:24598439-24598625 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 30-200 |
Cow position: | chr21:12961115-12960935 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 146 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 107, 9 |
Conread position: | 38-201 |
Cow position: | chr21:47067098-47066932 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 39-200 |
Cow position: | chr21:28907852-28907683 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 132 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 101, 21 |
Conread position: | 39-201 |
Cow position: | chr21:9710912-9710740 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 19 |
Conread position: | 39-201 |
Cow position: | chr21:15976436-15976599 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 30 |
Conread position: | 39-201 |
Cow position: | chr21:30990477-30990305 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 142 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 5, 22 |
Conread position: | 39-203 |
Cow position: | chr21:11645181-11645003 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 140 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 42-201 |
Cow position: | chr21:26244727-26244885 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 99, 24 |
Conread position: | 42-201 |
Cow position: | chr21:38120900-38121066 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 128 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 42-203 |
Cow position: | chr21:30849144-30848981 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 99, 15 |
Conread position: | 43-183 |
Cow position: | chr21:27341801-27341657 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 43-185 |
Cow position: | chr21:4399595-4399746 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 95, 12 |
Conread position: | 43-185 |
Cow position: | chr21:48484645-48484503 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 43-199 |
Cow position: | chr21:2904666-2904510 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 42, 12 |
Conread position: | 43-201 |
Cow position: | chr21:912172-912002 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 43-201 |
Cow position: | chr21:20262538-20262368 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 43-201 |
Cow position: | chr21:20925710-20925541 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 43-201 |
Cow position: | chr21:34658830-34658999 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 43-201 |
Cow position: | chr21:37479752-37479924 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 93, 12 |
Conread position: | 43-201 |
Cow position: | chr21:38691986-38692151 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 100, 38 |
Conread position: | 43-202 |
Cow position: | chr21:16612425-16612591 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 130 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 43-202 |
Cow position: | chr21:29069532-29069363 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 83, 5 |
Conread position: | 43-203 |
Cow position: | chr21:12616935-12617104 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 137 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 43-203 |
Cow position: | chr21:23150223-23150054 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 44-201 |
Cow position: | chr21:42190368-42190210 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 101, 11 |
Conread position: | 45-185 |
Cow position: | chr21:3236328-3236473 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 37 |
Conread position: | 45-185 |
Cow position: | chr21:46849325-46849177 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 94, 10 |
Conread position: | 45-199 |
Cow position: | chr21:36762849-36763003 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 10, 128 |
Conread position: | 45-200 |
Cow position: | chr21:38900571-38900742 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 10 |
Conread position: | 45-201 |
Cow position: | chr21:395674-395835 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 106, 13 |
Conread position: | 45-201 |
Cow position: | chr21:3585560-3585398 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 130 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 10, 22 |
Conread position: | 45-201 |
Cow position: | chr21:24797491-24797652 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 42 |
Conread position: | 45-201 |
Cow position: | chr21:32237095-32237260 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 96, 10 |
Conread position: | 45-201 |
Cow position: | chr21:44826080-44825920 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 130 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 45-201 |
Cow position: | chr21:47802464-47802292 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 46-193 |
Cow position: | chr21:24130880-24131037 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 83, 9 |
Conread position: | 46-201 |
Cow position: | chr21:23683349-23683513 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 132 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 79, 9 |
Conread position: | 46-201 |
Cow position: | chr21:33263646-33263814 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 39, 85 |
Conread position: | 47-199 |
Cow position: | chr21:643137-643291 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 96, 8 |
Conread position: | 47-201 |
Cow position: | chr21:641384-641551 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 83, 11 |
Conread position: | 47-201 |
Cow position: | chr21:44515072-44515229 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 8, 97 |
Conread position: | 48-201 |
Cow position: | chr21:34391169-34391010 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 131 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 97, 12 |
Conread position: | 48-201 |
Cow position: | chr21:41957375-41957211 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 49-203 |
Cow position: | chr21:2367142-2367301 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 94, 6 |
Conread position: | 53-201 |
Cow position: | chr21:34653889-34654041 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 30 |
Conread position: | 54-201 |
Cow position: | chr21:8985355-8985512 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 54-201 |
Cow position: | chr21:22860808-22860964 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 86, 27 |
Conread position: | 55-201 |
Cow position: | chr21:10263850-10263998 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 88, 26 |
Conread position: | 56-185 |
Cow position: | chr21:42053457-42053319 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 56-201 |
Cow position: | chr21:10601560-10601409 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 91, 25 |
Conread position: | 57-201 |
Cow position: | chr21:32559545-32559394 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 76, 120 |
Conread position: | 58-201 |
Cow position: | chr21:13365151-13365303 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 63-201 |
Cow position: | chr21:35897810-35897667 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 80, 8 |
Conread position: | 65-203 |
Cow position: | chr21:1510890-1511036 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 67-201 |
Cow position: | chr21:802475-802330 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 120 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 83-200 |
Cow position: | chr21:27624547-27624673 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 26 |
Show alignments to all cow chromosomes.