Cow genome map
| Conread name: | rsag034_i21.y1 |
| Conread position: | 1-201 |
| Cow position: | chr22:26658740-26658953 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 13-201 |
| Cow position: | chr22:2623816-2623621 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 19-202 |
| Cow position: | chr22:845605-845801 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 26-196 |
| Cow position: | chr22:4356813-4356987 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 26-201 |
| Cow position: | chr22:22612820-22613009 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 27-200 |
| Cow position: | chr22:1590733-1590920 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 27-200 |
| Cow position: | chr22:19775713-19775534 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 27-201 |
| Cow position: | chr22:23854694-23854872 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 32-201 |
| Cow position: | chr22:6935934-6936110 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 37-203 |
| Cow position: | chr22:4061218-4061046 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 39-203 |
| Cow position: | chr22:33949278-33949099 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 42-203 |
| Cow position: | chr22:17152407-17152581 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 42-203 |
| Cow position: | chr22:28370674-28370847 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 42-203 |
| Cow position: | chr22:30954767-30954936 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 43-199 |
| Cow position: | chr22:10122117-10122287 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 43-200 |
| Cow position: | chr22:15950648-15950482 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 43-200 |
| Cow position: | chr22:21012119-21012287 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:3316858-3317020 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:4017204-4017375 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 43-201 |
| Cow position: | chr22:17993303-17993134 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 43-201 |
| Cow position: | chr22:24611347-24611182 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:25943210-25943375 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:31646223-31646391 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:36193590-36193752 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 43-201 |
| Cow position: | chr22:38107425-38107594 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 43-201 |
| Cow position: | chr22:39472647-39472478 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 43-202 |
| Cow position: | chr22:3315857-3316010 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 43-203 |
| Cow position: | chr22:4645506-4645673 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 43-203 |
| Cow position: | chr22:9734585-9734754 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 43-203 |
| Cow position: | chr22:18258957-18259124 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 44-200 |
| Cow position: | chr22:26339487-26339653 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 44-203 |
| Cow position: | chr22:6123165-6123000 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 45-195 |
| Cow position: | chr22:31599112-31599270 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 45-199 |
| Cow position: | chr22:30698910-30699075 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 45-201 |
| Cow position: | chr22:23856777-23856947 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 45-201 |
| Cow position: | chr22:25743222-25743052 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 45-201 |
| Cow position: | chr22:43397748-43397911 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 45-203 |
| Cow position: | chr22:4043662-4043832 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 46-200 |
| Cow position: | chr22:41271258-41271102 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 46-201 |
| Cow position: | chr22:8357346-8357512 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 46-201 |
| Cow position: | chr22:9335551-9335388 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 47-201 |
| Cow position: | chr22:3251256-3251095 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 48-201 |
| Cow position: | chr22:39508302-39508144 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 48-203 |
| Cow position: | chr22:1342471-1342635 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 53-188 |
| Cow position: | chr22:10683927-10683776 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 54-194 |
| Cow position: | chr22:17852883-17852734 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 81, 27 |
| Conread position: | 54-194 |
| Cow position: | chr22:41982976-41982824 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 54-199 |
| Cow position: | chr22:16147605-16147750 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 54-203 |
| Cow position: | chr22:26097874-26097720 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 54-203 |
| Cow position: | chr22:30093985-30094145 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 47 |
| Conread position: | 54-203 |
| Cow position: | chr22:36569803-36569649 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 55-203 |
| Cow position: | chr22:6721325-6721173 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 55-203 |
| Cow position: | chr22:8138518-8138358 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 56-192 |
| Cow position: | chr22:4163771-4163907 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 57-201 |
| Cow position: | chr22:14601256-14601402 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 57-201 |
| Cow position: | chr22:34606335-34606483 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 59-188 |
| Cow position: | chr22:41971410-41971272 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 59-197 |
| Cow position: | chr22:1991233-1991375 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 60-200 |
| Cow position: | chr22:10294795-10294940 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 107 |
| Conread position: | 61-203 |
| Cow position: | chr22:6960614-6960759 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 62-188 |
| Cow position: | chr22:20863003-20862876 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 62-194 |
| Cow position: | chr22:40048310-40048448 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 71-201 |
| Cow position: | chr22:10567935-10567803 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 74-201 |
| Cow position: | chr22:23403882-23403748 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 74-203 |
| Cow position: | chr22:5384414-5384551 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 76-198 |
| Cow position: | chr22:43812657-43812524 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 65, 58 |
Show alignments to all cow chromosomes.