Cow genome map

Conread name: rsag034_i21.y1

Conread position: 2-201
Cow position: chr24:43200607-43200399 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 53

Conread position: 7-184
Cow position: chr24:8886591-8886771 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 134, 7

Conread position: 13-201
Cow position: chr24:18331416-18331601 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 96, 16

Conread position: 17-201
Cow position: chr24:35795061-35794859 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 22

Conread position: 19-203
Cow position: chr24:25991463-25991281 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 22

Conread position: 21-201
Cow position: chr24:28303660-28303476 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 34

Conread position: 21-201
Cow position: chr24:43432485-43432670 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 62

Conread position: 24-201
Cow position: chr24:16267482-16267655 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 114, 16

Conread position: 27-201
Cow position: chr24:16268412-16268236 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 13

Conread position: 32-185
Cow position: chr24:40257783-40257627 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 60

Conread position: 32-203
Cow position: chr24:17860555-17860376 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 7

Conread position: 33-201
Cow position: chr24:27941309-27941132 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 7

Conread position: 38-201
Cow position: chr24:11118983-11119162 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 17

Conread position: 39-203
Cow position: chr24:1269508-1269677 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 16

Conread position: 42-201
Cow position: chr24:28553837-28553670 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 88, 13

Conread position: 42-203
Cow position: chr24:39483183-39483356 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 15

Conread position: 43-185
Cow position: chr24:27290585-27290729 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 12

Conread position: 43-185
Cow position: chr24:44987666-44987522 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 12

Conread position: 43-187
Cow position: chr24:15246928-15246771 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 12

Conread position: 43-189
Cow position: chr24:40974715-40974865 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 43-190
Cow position: chr24:19658255-19658419 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 12

Conread position: 43-199
Cow position: chr24:3631225-3631384 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 12

Conread position: 43-200
Cow position: chr24:31159336-31159493 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 12

Conread position: 43-201
Cow position: chr24:17104859-17104695 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 12

Conread position: 43-201
Cow position: chr24:29063938-29063771 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 12

Conread position: 43-203
Cow position: chr24:33153490-33153656 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 12

Conread position: 44-201
Cow position: chr24:32370202-32370041 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 45-185
Cow position: chr24:12851442-12851583 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 34

Conread position: 45-201
Cow position: chr24:3493601-3493769 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 53

Conread position: 45-201
Cow position: chr24:18732413-18732246 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 13

Conread position: 45-202
Cow position: chr24:29180609-29180766 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 37

Conread position: 45-203
Cow position: chr24:6149738-6149904 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 53

Conread position: 46-199
Cow position: chr24:20923308-20923462 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 9

Conread position: 46-201
Cow position: chr24:27465863-27465700 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 47-201
Cow position: chr24:18970780-18970630 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 8

Conread position: 47-201
Cow position: chr24:30177948-30178112 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 8

Conread position: 48-194
Cow position: chr24:3165532-3165691 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 48-201
Cow position: chr24:30484232-30484073 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 34

Conread position: 54-185
Cow position: chr24:44054424-44054293 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 89

Conread position: 54-201
Cow position: chr24:20970074-20969922 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 54-201
Cow position: chr24:24491296-24491133 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 54-203
Cow position: chr24:37650388-37650549 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 55-201
Cow position: chr24:5754560-5754715 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 55-201
Cow position: chr24:43370966-43371124 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 57-201
Cow position: chr24:24250453-24250605 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 59-186
Cow position: chr24:35429950-35429813 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 32

Conread position: 59-201
Cow position: chr24:27967803-27967955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 62-193
Cow position: chr24:42380976-42380834 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 74, 39

Conread position: 69-201
Cow position: chr24:6450248-6450374 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 12

Conread position: 84-200
Cow position: chr24:31757933-31757821 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.