Cow genome map
| Conread name: | rsag034_i21.y1 |
| Conread position: | 31-201 |
| Cow position: | chr27:2592776-2592603 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 39-201 |
| Cow position: | chr27:25411291-25411462 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 42-185 |
| Cow position: | chr27:8291785-8291931 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 42-200 |
| Cow position: | chr27:4812650-4812824 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 42-200 |
| Cow position: | chr27:22171524-22171356 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 43-185 |
| Cow position: | chr27:25809299-25809444 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 43-199 |
| Cow position: | chr27:815589-815423 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 43-199 |
| Cow position: | chr27:26643897-26643737 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 43-200 |
| Cow position: | chr27:4829583-4829747 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 43-201 |
| Cow position: | chr27:6550675-6550512 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-201 |
| Cow position: | chr27:14670158-14670329 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 43-201 |
| Cow position: | chr27:28518509-28518344 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-203 |
| Cow position: | chr27:1123245-1123084 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 43-203 |
| Cow position: | chr27:6074140-6073974 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 43-203 |
| Cow position: | chr27:23483449-23483280 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 44-185 |
| Cow position: | chr27:11435110-11435250 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 44-203 |
| Cow position: | chr27:26617585-26617420 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 45-201 |
| Cow position: | chr27:16620215-16620043 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-201 |
| Cow position: | chr27:31230872-31231038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 12 |
| Conread position: | 45-203 |
| Cow position: | chr27:26581224-26581382 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 46-201 |
| Cow position: | chr27:20796005-20795842 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 46-203 |
| Cow position: | chr27:24014520-24014687 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 46-203 |
| Cow position: | chr27:29493696-29493859 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 47-203 |
| Cow position: | chr27:18922670-18922504 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 47-203 |
| Cow position: | chr27:24445936-24446105 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 48-201 |
| Cow position: | chr27:26959399-26959563 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 52-201 |
| Cow position: | chr27:20354796-20354639 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 54-199 |
| Cow position: | chr27:20553931-20553777 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 54-201 |
| Cow position: | chr27:20067765-20067923 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 54-201 |
| Cow position: | chr27:22179583-22179739 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 54-203 |
| Cow position: | chr27:4673235-4673072 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 54-203 |
| Cow position: | chr27:27528147-27528308 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 54-203 |
| Cow position: | chr27:30551210-30551050 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 55-199 |
| Cow position: | chr27:20283844-20283699 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 55-201 |
| Cow position: | chr27:28164198-28164351 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 62 |
| Conread position: | 58-203 |
| Cow position: | chr27:20641136-20641288 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 59-200 |
| Cow position: | chr27:4824912-4825057 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 60-202 |
| Cow position: | chr27:27136317-27136465 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 61-185 |
| Cow position: | chr27:25277342-25277212 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 7 |
| Conread position: | 61-201 |
| Cow position: | chr27:1498521-1498372 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 61-201 |
| Cow position: | chr27:26625334-26625180 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 62-200 |
| Cow position: | chr27:1884244-1884093 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 63-201 |
| Cow position: | chr27:19685509-19685656 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.