Cow genome map
| Conread name: | rsag034_i21.y1 |
| Conread position: | 3-200 |
| Cow position: | chr29:34774034-34773835 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 5-201 |
| Cow position: | chr29:12679847-12680058 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 9-201 |
| Cow position: | chr29:5099063-5098860 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 27-201 |
| Cow position: | chr29:12784240-12784056 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 27-201 |
| Cow position: | chr29:16195566-16195750 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 39-201 |
| Cow position: | chr29:25088480-25088653 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 43-194 |
| Cow position: | chr29:45588744-45588580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 43-199 |
| Cow position: | chr29:3395841-3396004 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-199 |
| Cow position: | chr29:4328165-4328322 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-199 |
| Cow position: | chr29:6635835-6635995 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-199 |
| Cow position: | chr29:34360063-34359904 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 43-200 |
| Cow position: | chr29:17109699-17109867 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 43-201 |
| Cow position: | chr29:10156558-10156405 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 43-201 |
| Cow position: | chr29:10456821-10456659 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 43-201 |
| Cow position: | chr29:35501917-35501751 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 43-201 |
| Cow position: | chr29:36216849-36217017 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 44-200 |
| Cow position: | chr29:356058-356224 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 44-201 |
| Cow position: | chr29:35291831-35291990 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 45-200 |
| Cow position: | chr29:5062863-5063027 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-201 |
| Cow position: | chr29:11136157-11135991 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-201 |
| Cow position: | chr29:45005883-45005725 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 46-185 |
| Cow position: | chr29:9638578-9638434 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 47-201 |
| Cow position: | chr29:26734768-26734929 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 47-201 |
| Cow position: | chr29:39111573-39111415 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 53-200 |
| Cow position: | chr29:21665710-21665869 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 54-201 |
| Cow position: | chr29:5046533-5046378 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 54-201 |
| Cow position: | chr29:37599463-37599307 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 57-201 |
| Cow position: | chr29:22162509-22162353 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 58-200 |
| Cow position: | chr29:9911922-9912071 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 59-203 |
| Cow position: | chr29:31594369-31594228 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 63-201 |
| Cow position: | chr29:6925769-6925912 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 63-203 |
| Cow position: | chr29:25737667-25737516 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 67-194 |
| Cow position: | chr29:10235361-10235236 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 71-201 |
| Cow position: | chr29:16309508-16309642 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.