Cow genome map
Conread name: | rsag034_i21.y1 |
Conread position: | 1-201 |
Cow position: | chr4:5461170-5460966 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 7-197 |
Cow position: | chr4:47348523-47348717 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 157 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 41, 5 |
Conread position: | 16-200 |
Cow position: | chr4:63349776-63349582 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 74, 11 |
Conread position: | 16-201 |
Cow position: | chr4:41867142-41867338 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 149 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 21-194 |
Cow position: | chr4:48499552-48499726 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 122, 20 |
Conread position: | 21-200 |
Cow position: | chr4:52748754-52748565 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 154 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 120, 18 |
Conread position: | 21-201 |
Cow position: | chr4:51783880-51784072 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 148 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 15, 37 |
Conread position: | 27-185 |
Cow position: | chr4:54930708-54930547 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 27-201 |
Cow position: | chr4:8801212-8801395 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 57, 170 |
Conread position: | 27-201 |
Cow position: | chr4:34630610-34630787 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 112, 54 |
Conread position: | 27-201 |
Cow position: | chr4:51739995-51739815 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 27-203 |
Cow position: | chr4:27292250-27292060 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 101, 28 |
Conread position: | 28-201 |
Cow position: | chr4:44073061-44072872 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 13 |
Conread position: | 31-200 |
Cow position: | chr4:27529827-27530010 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 110, 9 |
Conread position: | 32-201 |
Cow position: | chr4:13832887-13832710 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 74, 8 |
Conread position: | 33-199 |
Cow position: | chr4:4084732-4084556 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 22, 6 |
Conread position: | 35-199 |
Cow position: | chr4:54190817-54190980 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 104, 20 |
Conread position: | 39-201 |
Cow position: | chr4:8947125-8947287 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 124, 16 |
Conread position: | 40-187 |
Cow position: | chr4:56240123-56239970 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 103, 15 |
Conread position: | 42-200 |
Cow position: | chr4:21874556-21874709 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 18 |
Conread position: | 42-203 |
Cow position: | chr4:24458373-24458203 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 140 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 101, 15 |
Conread position: | 43-182 |
Cow position: | chr4:28377924-28377778 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 120 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 83, 12 |
Conread position: | 43-185 |
Cow position: | chr4:4736762-4736906 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 11, 39 |
Conread position: | 43-185 |
Cow position: | chr4:47773907-47773758 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 105, 12 |
Conread position: | 43-188 |
Cow position: | chr4:18255589-18255737 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 94, 14 |
Conread position: | 43-194 |
Cow position: | chr4:33971172-33971011 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 34, 12 |
Conread position: | 43-200 |
Cow position: | chr4:30574181-30574344 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 43-201 |
Cow position: | chr4:19434986-19435153 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 43-201 |
Cow position: | chr4:33097237-33097082 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 120, 9 |
Conread position: | 43-201 |
Cow position: | chr4:37915604-37915444 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 101, 12 |
Conread position: | 43-201 |
Cow position: | chr4:40414906-40414734 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 83, 12 |
Conread position: | 43-201 |
Cow position: | chr4:45662775-45662615 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 104, 12 |
Conread position: | 43-201 |
Cow position: | chr4:46274918-46275086 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 95, 12 |
Conread position: | 43-201 |
Cow position: | chr4:51727808-51727970 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 43-203 |
Cow position: | chr4:27540346-27540517 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 141 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 83, 15 |
Conread position: | 43-203 |
Cow position: | chr4:66112352-66112177 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 44-199 |
Cow position: | chr4:16602325-16602161 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 92, 11 |
Conread position: | 44-199 |
Cow position: | chr4:59871224-59871377 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 44-203 |
Cow position: | chr4:3687654-3687819 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 99, 11 |
Conread position: | 44-203 |
Cow position: | chr4:19097018-19097185 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 136 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 45-194 |
Cow position: | chr4:53134338-53134496 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 102, 10 |
Conread position: | 45-200 |
Cow position: | chr4:29237425-29237265 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 10, 61 |
Conread position: | 45-201 |
Cow position: | chr4:23853929-23854090 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 130 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 12, 122 |
Conread position: | 45-201 |
Cow position: | chr4:49629224-49629377 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 123 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 45-203 |
Cow position: | chr4:37703991-37704162 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 10, 37 |
Conread position: | 46-201 |
Cow position: | chr4:480279-480111 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 98, 9 |
Conread position: | 46-201 |
Cow position: | chr4:62471796-62471966 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 136 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 95, 9 |
Conread position: | 46-203 |
Cow position: | chr4:17112149-17111981 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 92, 9 |
Conread position: | 46-203 |
Cow position: | chr4:19497522-19497356 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 135 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 95, 9 |
Conread position: | 46-203 |
Cow position: | chr4:48485721-48485900 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 141 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 34, 9 |
Conread position: | 47-200 |
Cow position: | chr4:33433531-33433371 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 8, 35 |
Conread position: | 47-201 |
Cow position: | chr4:19597584-19597422 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 128 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 47-201 |
Cow position: | chr4:49992813-49992972 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 8, 129 |
Conread position: | 47-203 |
Cow position: | chr4:8413381-8413224 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 81, 8 |
Conread position: | 47-203 |
Cow position: | chr4:22072946-22072774 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 133 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 48-200 |
Cow position: | chr4:21392074-21391920 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 78, 7 |
Conread position: | 48-201 |
Cow position: | chr4:56233421-56233581 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 93, 7 |
Conread position: | 48-203 |
Cow position: | chr4:14470840-14470674 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 7, 39 |
Conread position: | 49-203 |
Cow position: | chr4:31136486-31136647 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 134 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 42, 6 |
Conread position: | 50-201 |
Cow position: | chr4:2141476-2141639 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 5, 32 |
Conread position: | 53-203 |
Cow position: | chr4:14505266-14505120 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 110 |
Conread position: | 53-203 |
Cow position: | chr4:33612629-33612463 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 54-201 |
Cow position: | chr4:23847316-23847154 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 56-201 |
Cow position: | chr4:10471960-10472117 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 56-201 |
Cow position: | chr4:65919355-65919507 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 87, 25 |
Conread position: | 57-199 |
Cow position: | chr4:43909490-43909635 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 58-201 |
Cow position: | chr4:1985388-1985537 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 59-194 |
Cow position: | chr4:61066392-61066536 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 60-201 |
Cow position: | chr4:2536574-2536725 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 81, 31 |
Conread position: | 62-201 |
Cow position: | chr4:25983970-25984120 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 63-202 |
Cow position: | chr4:42922102-42921956 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 121 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 64-201 |
Cow position: | chr4:40410375-40410227 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 72-201 |
Cow position: | chr4:21233118-21232980 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 112 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 72-201 |
Cow position: | chr4:29291275-29291413 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 73-201 |
Cow position: | chr4:21531887-21531750 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 66, 44 |
Show alignments to all cow chromosomes.