Cow genome map

Conread name: rsag034_i21.y1

Conread position: 12-201
Cow position: chr7:16022046-16022241 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 132, 16

Conread position: 15-194
Cow position: chr7:17967368-17967181 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 5

Conread position: 17-203
Cow position: chr7:47046231-47046411 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 40

Conread position: 19-199
Cow position: chr7:20827863-20827679 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 8

Conread position: 21-200
Cow position: chr7:52383217-52383033 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 19

Conread position: 21-201
Cow position: chr7:39930050-39930235 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 18

Conread position: 26-196
Cow position: chr7:49395799-49395619 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 14

Conread position: 26-201
Cow position: chr7:36996136-36996318 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 113, 13

Conread position: 26-201
Cow position: chr7:42244940-42244750 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 30

Conread position: 27-200
Cow position: chr7:37455079-37455263 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 29

Conread position: 28-201
Cow position: chr7:17713705-17713529 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 105, 27

Conread position: 31-194
Cow position: chr7:18288847-18288676 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 9

Conread position: 37-201
Cow position: chr7:40566842-40567015 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 18

Conread position: 39-185
Cow position: chr7:60748954-60749105 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 43

Conread position: 39-200
Cow position: chr7:64948891-64949055 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 42

Conread position: 39-201
Cow position: chr7:3256575-3256410 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 43

Conread position: 39-201
Cow position: chr7:44596921-44596756 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 43

Conread position: 40-201
Cow position: chr7:48020207-48020364 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 41-203
Cow position: chr7:29026945-29027101 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 14

Conread position: 42-185
Cow position: chr7:33385707-33385854 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 101, 13

Conread position: 42-199
Cow position: chr7:47503430-47503596 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 42-201
Cow position: chr7:10512939-10512766 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 13

Conread position: 42-201
Cow position: chr7:17782901-17782735 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 42-201
Cow position: chr7:30172295-30172143 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 42-201
Cow position: chr7:56820798-56820628 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 13

Conread position: 42-203
Cow position: chr7:49750897-49751072 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 18

Conread position: 43-182
Cow position: chr7:42223172-42223025 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 12

Conread position: 43-183
Cow position: chr7:19798158-19798014 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 14

Conread position: 43-185
Cow position: chr7:268770-268918 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 12

Conread position: 43-185
Cow position: chr7:40894295-40894452 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 12

Conread position: 43-185
Cow position: chr7:45157907-45158047 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 12

Conread position: 43-194
Cow position: chr7:53988835-53988989 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 12

Conread position: 43-198
Cow position: chr7:35300773-35300607 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 12

Conread position: 43-200
Cow position: chr7:14542277-14542116 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 12

Conread position: 43-200
Cow position: chr7:19267595-19267426 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 12

Conread position: 43-200
Cow position: chr7:32914886-32915052 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 12

Conread position: 43-200
Cow position: chr7:45927380-45927215 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 12

Conread position: 43-201
Cow position: chr7:9136613-9136777 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 14

Conread position: 43-201
Cow position: chr7:28090015-28090176 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 12

Conread position: 43-201
Cow position: chr7:48243453-48243617 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 12

Conread position: 43-201
Cow position: chr7:53097373-53097531 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 116, 12

Conread position: 43-203
Cow position: chr7:21315883-21316054 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 96, 12

Conread position: 43-203
Cow position: chr7:21326818-21326980 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 12

Conread position: 43-203
Cow position: chr7:23205859-23205686 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 12

Conread position: 43-203
Cow position: chr7:27079408-27079572 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 9

Conread position: 43-203
Cow position: chr7:34422487-34422323 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 12

Conread position: 43-203
Cow position: chr7:35275297-35275135 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 12

Conread position: 43-203
Cow position: chr7:36533803-36533977 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 14

Conread position: 43-203
Cow position: chr7:39325517-39325686 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 12

Conread position: 43-203
Cow position: chr7:40074468-40074620 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 43-203
Cow position: chr7:43710994-43711164 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 12

Conread position: 43-203
Cow position: chr7:49106428-49106256 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 12

Conread position: 43-203
Cow position: chr7:60483648-60483481 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 12

Conread position: 43-203
Cow position: chr7:62793557-62793731 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 12

Conread position: 44-203
Cow position: chr7:26632038-26631868 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 44-203
Cow position: chr7:28584024-28584192 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 11

Conread position: 44-203
Cow position: chr7:36278068-36278241 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 45-200
Cow position: chr7:46148640-46148804 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 57

Conread position: 45-201
Cow position: chr7:205530-205691 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 36

Conread position: 45-201
Cow position: chr7:15755673-15755506 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 10

Conread position: 45-201
Cow position: chr7:29010617-29010451 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 45-201
Cow position: chr7:33697747-33697899 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 93

Conread position: 45-203
Cow position: chr7:17756815-17756983 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 10

Conread position: 46-185
Cow position: chr7:39518078-39518226 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 9

Conread position: 46-193
Cow position: chr7:39988186-39988338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 9

Conread position: 46-200
Cow position: chr7:61818157-61817996 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 9

Conread position: 46-201
Cow position: chr7:6041762-6041920 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 25

Conread position: 46-201
Cow position: chr7:9074837-9074999 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 11

Conread position: 46-201
Cow position: chr7:11870052-11869895 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 5

Conread position: 46-201
Cow position: chr7:23099259-23099100 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 9

Conread position: 46-201
Cow position: chr7:61128996-61129165 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 9

Conread position: 46-203
Cow position: chr7:10449006-10448835 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 9

Conread position: 46-203
Cow position: chr7:66748747-66748579 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 144
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 9

Conread position: 47-194
Cow position: chr7:17950646-17950795 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 101, 8

Conread position: 47-200
Cow position: chr7:44590068-44589908 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 8

Conread position: 47-201
Cow position: chr7:58427874-58428022 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 136, 8

Conread position: 47-203
Cow position: chr7:25496518-25496679 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 34

Conread position: 48-201
Cow position: chr7:15569824-15569985 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 9

Conread position: 49-185
Cow position: chr7:8813148-8813002 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 49-201
Cow position: chr7:23619305-23619142 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 6

Conread position: 51-201
Cow position: chr7:22793128-22793292 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 54-200
Cow position: chr7:37361668-37361823 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 54-201
Cow position: chr7:13928370-13928211 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 54-201
Cow position: chr7:29300974-29300813 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 39

Conread position: 54-201
Cow position: chr7:62553227-62553380 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 27

Conread position: 54-203
Cow position: chr7:20968216-20968380 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 54-203
Cow position: chr7:38081940-38082101 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 55-200
Cow position: chr7:34716031-34716190 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 55-201
Cow position: chr7:14450140-14450284 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 55-201
Cow position: chr7:47697810-47697959 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 26

Conread position: 56-198
Cow position: chr7:32221804-32221949 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 56-200
Cow position: chr7:31881474-31881619 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 70

Conread position: 56-203
Cow position: chr7:40406448-40406604 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 80

Conread position: 59-201
Cow position: chr7:52718845-52718691 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 64-203
Cow position: chr7:9939-10090 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 8

Conread position: 65-194
Cow position: chr7:14712398-14712264 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 70-203
Cow position: chr7:68170801-68170654 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 73-201
Cow position: chr7:59168081-59168215 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 87-200
Cow position: chr7:8090559-8090442 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 19

Show alignments to all cow chromosomes.