Cow genome map
Conread name: | rsag034_i21.y1 |
Conread position: | 1-194 |
Cow position: | chrX:9635472-9635260 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1-200 |
Cow position: | chrX:4768467-4768670 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 1-201 |
Cow position: | chrX:9416982-9416765 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 162 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 1-201 |
Cow position: | chrX:21672268-21672484 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 26, 40 |
Conread position: | 4-203 |
Cow position: | chrX:33493491-33493707 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 163 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 23, 80 |
Conread position: | 17-200 |
Cow position: | chrX:23970124-23970311 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 151 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 124, 10 |
Conread position: | 17-201 |
Cow position: | chrX:39558613-39558422 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 11, 5 |
Conread position: | 17-202 |
Cow position: | chrX:7513245-7513443 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 11, 72 |
Conread position: | 20-188 |
Cow position: | chrX:13912814-13912994 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 36 |
Conread position: | 26-199 |
Cow position: | chrX:17662852-17662667 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 115, 13 |
Conread position: | 27-199 |
Cow position: | chrX:43567681-43567848 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 29, 13 |
Conread position: | 27-201 |
Cow position: | chrX:23514276-23514087 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 149 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 27-201 |
Cow position: | chrX:34543529-34543716 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 33-200 |
Cow position: | chrX:26876131-26875956 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 110, 7 |
Conread position: | 33-201 |
Cow position: | chrX:877273-877098 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 104, 17 |
Conread position: | 35-201 |
Cow position: | chrX:41743664-41743840 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 138 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 106, 20 |
Conread position: | 39-199 |
Cow position: | chrX:24424634-24424462 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 39-200 |
Cow position: | chrX:12249560-12249730 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 39-201 |
Cow position: | chrX:27680156-27680327 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 16, 45 |
Conread position: | 40-200 |
Cow position: | chrX:619254-619077 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 42-194 |
Cow position: | chrX:46990026-46989869 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 43-185 |
Cow position: | chrX:33803254-33803097 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 79, 12 |
Conread position: | 43-190 |
Cow position: | chrX:28847120-28846965 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 94, 17 |
Conread position: | 43-197 |
Cow position: | chrX:17725737-17725898 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 98, 14 |
Conread position: | 43-200 |
Cow position: | chrX:35413389-35413547 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 12, 101 |
Conread position: | 43-201 |
Cow position: | chrX:7646017-7646184 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 43-201 |
Cow position: | chrX:7695520-7695677 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 128 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 118, 12 |
Conread position: | 43-201 |
Cow position: | chrX:17497855-17498013 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 111, 12 |
Conread position: | 43-201 |
Cow position: | chrX:18695162-18694996 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 43-201 |
Cow position: | chrX:19015201-19015366 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 96, 14 |
Conread position: | 43-201 |
Cow position: | chrX:23497904-23497740 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 136 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 93, 12 |
Conread position: | 43-201 |
Cow position: | chrX:28878403-28878241 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 40, 12 |
Conread position: | 43-201 |
Cow position: | chrX:34401756-34401926 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 88, 17 |
Conread position: | 43-201 |
Cow position: | chrX:35268649-35268810 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 43-201 |
Cow position: | chrX:38967409-38967576 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 43-201 |
Cow position: | chrX:45430259-45430088 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 43-203 |
Cow position: | chrX:22482930-22482756 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 43-203 |
Cow position: | chrX:34532290-34532451 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 43-203 |
Cow position: | chrX:34990800-34990965 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 104, 12 |
Conread position: | 43-203 |
Cow position: | chrX:45414541-45414370 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 101, 12 |
Conread position: | 44-188 |
Cow position: | chrX:19930415-19930570 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 83, 37 |
Conread position: | 44-189 |
Cow position: | chrX:29049728-29049880 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 14, 38 |
Conread position: | 44-192 |
Cow position: | chrX:31294782-31294638 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 123 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 119, 11 |
Conread position: | 44-198 |
Cow position: | chrX:17888646-17888489 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 94, 11 |
Conread position: | 44-201 |
Cow position: | chrX:9997573-9997407 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 45-185 |
Cow position: | chrX:25283385-25283238 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 10 |
Conread position: | 45-200 |
Cow position: | chrX:12437480-12437325 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 131 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 10, 37 |
Conread position: | 45-201 |
Cow position: | chrX:8925464-8925629 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 32, 10 |
Conread position: | 45-201 |
Cow position: | chrX:20582789-20582956 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 45-201 |
Cow position: | chrX:31436239-31436406 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 45-201 |
Cow position: | chrX:38094766-38094593 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 10, 37 |
Conread position: | 45-203 |
Cow position: | chrX:6544015-6544186 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 46-196 |
Cow position: | chrX:15147424-15147266 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 46-199 |
Cow position: | chrX:13648022-13647859 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 7 |
Conread position: | 46-201 |
Cow position: | chrX:28866230-28866071 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 128 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 83, 9 |
Conread position: | 46-203 |
Cow position: | chrX:5118723-5118572 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 46-203 |
Cow position: | chrX:11939162-11938997 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 92, 9 |
Conread position: | 46-203 |
Cow position: | chrX:35388145-35387972 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 137 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 38, 9 |
Conread position: | 47-201 |
Cow position: | chrX:41122835-41122996 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 89, 8 |
Conread position: | 47-201 |
Cow position: | chrX:45113391-45113547 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 96, 8 |
Conread position: | 47-203 |
Cow position: | chrX:34192439-34192603 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 91, 61 |
Conread position: | 49-200 |
Cow position: | chrX:28097888-28098045 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 33 |
Conread position: | 54-194 |
Cow position: | chrX:42470168-42470020 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 123 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 54-203 |
Cow position: | chrX:37910222-37910376 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 89, 14 |
Conread position: | 55-201 |
Cow position: | chrX:37489500-37489656 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 56-185 |
Cow position: | chrX:45787425-45787563 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 56-199 |
Cow position: | chrX:13265849-13265697 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 59-201 |
Cow position: | chrX:4942976-4942826 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 59-203 |
Cow position: | chrX:22074574-22074730 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 60-203 |
Cow position: | chrX:4750523-4750374 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 79, 21 |
Conread position: | 64-203 |
Cow position: | chrX:37574635-37574781 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 121 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 75, 108 |
Conread position: | 65-189 |
Cow position: | chrX:23091661-23091797 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 111 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 74-203 |
Cow position: | chrX:29542430-29542289 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.