Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-478
Cow position:
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 259

Conread position: 9-479
Cow position:
Alignm length: 503
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 173

Conread position: 17-479
Cow position:
Alignm length: 477
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 140

Conread position: 18-155
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 18-345
Cow position:
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 311

Conread position: 18-399
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 375

Conread position: 18-476
Cow position:
Alignm length: 490
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 18-479
Cow position:
Alignm length: 497
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 201

Conread position: 18-479
Cow position:
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 19-199
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 19-288
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 19-297
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 186

Conread position: 19-309
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 19

Conread position: 19-367
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 299

Conread position: 19-399
Cow position:
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-464
Cow position:
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 19-468
Cow position:
Alignm length: 469
Alignm identity: 303
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 56

Conread position: 19-477
Cow position:
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 62

Conread position: 19-477
Cow position:
Alignm length: 485
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 346

Conread position: 19-477
Cow position:
Alignm length: 489
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-477
Cow position:
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 212

Conread position: 19-478
Cow position:
Alignm length: 488
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 489
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 319

Conread position: 19-478
Cow position:
Alignm length: 482
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 492
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 174

Conread position: 19-478
Cow position:
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 335

Conread position: 19-478
Cow position:
Alignm length: 490
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-479
Cow position:
Alignm length: 473
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 202

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 19-479
Cow position:
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 324

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 397

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 391

Conread position: 19-479
Cow position:
Alignm length: 504
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 273

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 100

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 19-480
Cow position:
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 426

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 390

Conread position: 19-480
Cow position:
Alignm length: 491
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 357

Conread position: 19-480
Cow position:
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 260

Conread position: 19-480
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 291

Conread position: 19-481
Cow position:
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 121

Conread position: 19-482
Cow position:
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 160

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 355

Conread position: 20-205
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 52

Conread position: 20-230
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 55

Conread position: 20-256
Cow position:
Alignm length: 250
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 20-345
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 81

Conread position: 20-402
Cow position:
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 195

Conread position: 20-475
Cow position:
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 20-475
Cow position:
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 111

Conread position: 20-478
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 290

Conread position: 20-478
Cow position:
Alignm length: 494
Alignm identity: 331
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 42

Conread position: 20-478
Cow position:
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 264

Conread position: 20-479
Cow position:
Alignm length: 501
Alignm identity: 335
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 405

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 255

Conread position: 20-479
Cow position:
Alignm length: 495
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 300

Conread position: 20-479
Cow position:
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 399

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 45

Conread position: 20-480
Cow position:
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 348

Conread position: 20-480
Cow position:
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 107

Conread position: 20-482
Cow position:
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 12

Conread position: 21-406
Cow position:
Alignm length: 397
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 125, 17

Conread position: 21-453
Cow position:
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 61

Conread position: 21-478
Cow position:
Alignm length: 494
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 399

Conread position: 22-299
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 23-343
Cow position:
Alignm length: 341
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 48

Conread position: 23-397
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 10

Conread position: 23-453
Cow position:
Alignm length: 454
Alignm identity: 306
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 36

Conread position: 23-482
Cow position:
Alignm length: 493
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 28-353
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 20

Conread position: 29-479
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 359

Conread position: 31-479
Cow position:
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 31-481
Cow position:
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 32-474
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 39

Conread position: 36-357
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 35

Conread position: 38-345
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 21

Conread position: 39-479
Cow position:
Alignm length: 472
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 48-220
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 9

Conread position: 58-459
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 63-293
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 63-479
Cow position:
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 417

Conread position: 63-479
Cow position:
Alignm length: 436
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 86-231
Cow position:
Alignm length: 153
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 86-475
Cow position:
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 203

Conread position: 86-477
Cow position:
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 283

Conread position: 86-477
Cow position:
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 86-479
Cow position:
Alignm length: 421
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 322

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 88-231
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 88-479
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 244

Conread position: 108-479
Cow position:
Alignm length: 394
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 108-479
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 341

Conread position: 126-482
Cow position:
Alignm length: 370
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 255

Conread position: 132-479
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 157, 17

Conread position: 139-478
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 147-481
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 158-481
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 123

Conread position: 161-478
Cow position:
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 255

Conread position: 163-479
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 134

Conread position: 169-481
Cow position:
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 182-481
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 182

Conread position: 184-480
Cow position:
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 193-479
Cow position:
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.