Cow genome map

Conread name: rsag15_c7.y1

Conread position: 13-479
Cow position:
Alignm length: 513
Alignm identity: 338
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 358

Conread position: 14-479
Cow position:
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 344

Conread position: 17-390
Cow position:
Alignm length: 398
Alignm identity: 258
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 15

Conread position: 18-234
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 117, 73

Conread position: 18-276
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 18-478
Cow position:
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 18-479
Cow position:
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 18-479
Cow position:
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 18-480
Cow position:
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 19-228
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 173

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 19-288
Cow position:
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 19-316
Cow position:
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-357
Cow position:
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 19-365
Cow position:
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 162

Conread position: 19-380
Cow position:
Alignm length: 387
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-391
Cow position:
Alignm length: 404
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-444
Cow position:
Alignm length: 449
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 385

Conread position: 19-461
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 121

Conread position: 19-466
Cow position:
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 19-473
Cow position:
Alignm length: 476
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 19-475
Cow position:
Alignm length: 490
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-476
Cow position:
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 19-477
Cow position:
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 393

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 175

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 309

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 40

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 320

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 256

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 297

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 46

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 23

Conread position: 19-479
Cow position:
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 460

Conread position: 19-480
Cow position:
Alignm length: 484
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 19-480
Cow position:
Alignm length: 501
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 417

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 122

Conread position: 19-481
Cow position:
Alignm length: 499
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-482
Cow position:
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 19-482
Cow position:
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 110

Conread position: 20-280
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 20-357
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 55

Conread position: 20-440
Cow position:
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 20-454
Cow position:
Alignm length: 462
Alignm identity: 311
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 47, 262

Conread position: 20-479
Cow position:
Alignm length: 487
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 20-481
Cow position:
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-482
Cow position:
Alignm length: 486
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 23

Conread position: 21-231
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 54

Conread position: 21-280
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 64, 17

Conread position: 21-347
Cow position:
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 21-476
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 54

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 468

Conread position: 22-479
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 23-298
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 23-480
Cow position:
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 48

Conread position: 29-339
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 36

Conread position: 29-368
Cow position:
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 292

Conread position: 36-225
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 21

Conread position: 36-477
Cow position:
Alignm length: 453
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 38-474
Cow position:
Alignm length: 467
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 39-478
Cow position:
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 63-364
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 65-473
Cow position:
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 65-479
Cow position:
Alignm length: 445
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 65-479
Cow position:
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 398

Conread position: 69-458
Cow position:
Alignm length: 403
Alignm identity: 256
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 12

Conread position: 91-419
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 45, 23

Conread position: 91-425
Cow position:
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 110-461
Cow position:
Alignm length: 369
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 35

Conread position: 113-343
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 113-477
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 235

Conread position: 115-464
Cow position:
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 127-470
Cow position:
Alignm length: 367
Alignm identity: 239
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 180

Conread position: 131-468
Cow position:
Alignm length: 355
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 184

Conread position: 147-457
Cow position:
Alignm length: 329
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 167

Conread position: 164-479
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 72

Conread position: 193-479
Cow position:
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.