Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-349
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 43

Conread position: 1-479
Cow position:
Alignm length: 503
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 60

Conread position: 4-482
Cow position:
Alignm length: 507
Alignm identity: 343
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 7

Conread position: 14-241
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 214

Conread position: 18-426
Cow position:
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 18-479
Cow position:
Alignm length: 486
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 39

Conread position: 18-481
Cow position:
Alignm length: 495
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 19-165
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 52, 93

Conread position: 19-181
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 91

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 0

Conread position: 19-279
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 19-299
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 56

Conread position: 19-306
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 19-306
Cow position:
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-363
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-368
Cow position:
Alignm length: 377
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-368
Cow position:
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-386
Cow position:
Alignm length: 392
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 31

Conread position: 19-411
Cow position:
Alignm length: 421
Alignm identity: 283
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 294

Conread position: 19-422
Cow position:
Alignm length: 444
Alignm identity: 300
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 48, 117

Conread position: 19-450
Cow position:
Alignm length: 461
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 19-454
Cow position:
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-455
Cow position:
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-458
Cow position:
Alignm length: 461
Alignm identity: 297
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 75

Conread position: 19-468
Cow position:
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 327

Conread position: 19-473
Cow position:
Alignm length: 478
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 19-473
Cow position:
Alignm length: 489
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 331

Conread position: 19-474
Cow position:
Alignm length: 482
Alignm identity: 310
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 56

Conread position: 19-476
Cow position:
Alignm length: 490
Alignm identity: 323
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 401

Conread position: 19-477
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 42

Conread position: 19-478
Cow position:
Alignm length: 497
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 19-478
Cow position:
Alignm length: 490
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-478
Cow position:
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 303

Conread position: 19-478
Cow position:
Alignm length: 489
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 126

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 117

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 319

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 307

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 339

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 358

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 74

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 67

Conread position: 19-480
Cow position:
Alignm length: 498
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-480
Cow position:
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-481
Cow position:
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 113

Conread position: 19-481
Cow position:
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 86

Conread position: 19-482
Cow position:
Alignm length: 486
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 412

Conread position: 19-482
Cow position:
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 221

Conread position: 20-181
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 20-231
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 55

Conread position: 20-241
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 17

Conread position: 20-299
Cow position:
Alignm length: 299
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 18

Conread position: 20-367
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 18

Conread position: 20-471
Cow position:
Alignm length: 492
Alignm identity: 331
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 51, 92

Conread position: 20-474
Cow position:
Alignm length: 472
Alignm identity: 310
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 74

Conread position: 20-478
Cow position:
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 20-479
Cow position:
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 392

Conread position: 20-479
Cow position:
Alignm length: 494
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 112

Conread position: 20-480
Cow position:
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 20-481
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 20-481
Cow position:
Alignm length: 488
Alignm identity: 324
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 70, 28

Conread position: 20-482
Cow position:
Alignm length: 492
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 405

Conread position: 21-480
Cow position:
Alignm length: 491
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 405

Conread position: 21-481
Cow position:
Alignm length: 489
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 426

Conread position: 21-481
Cow position:
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 207

Conread position: 21-481
Cow position:
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 46

Conread position: 23-405
Cow position:
Alignm length: 407
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 102

Conread position: 25-479
Cow position:
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 29-356
Cow position:
Alignm length: 355
Alignm identity: 242
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 28

Conread position: 29-480
Cow position:
Alignm length: 480
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 395

Conread position: 35-479
Cow position:
Alignm length: 474
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 39-479
Cow position:
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 57-479
Cow position:
Alignm length: 450
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 64-478
Cow position:
Alignm length: 450
Alignm identity: 305
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 42

Conread position: 85-473
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 88-475
Cow position:
Alignm length: 399
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 145, 53

Conread position: 91-349
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 52

Conread position: 92-482
Cow position:
Alignm length: 407
Alignm identity: 281
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 59

Conread position: 97-454
Cow position:
Alignm length: 382
Alignm identity: 247
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 151

Conread position: 99-482
Cow position:
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 189

Conread position: 105-478
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 19

Conread position: 127-476
Cow position:
Alignm length: 374
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 177

Conread position: 128-481
Cow position:
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 139-453
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 82, 11

Conread position: 141-481
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 293

Conread position: 144-368
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 147-480
Cow position:
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 152-479
Cow position:
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 162-480
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 71, 257

Conread position: 171-479
Cow position:
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 183

Conread position: 179-474
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 98

Conread position: 179-480
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 94

Conread position: 186-479
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 193-477
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 142

Show alignments to all cow chromosomes.