Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-479
Cow position:
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 9-342
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 14-481
Cow position:
Alignm length: 476
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 79

Conread position: 15-320
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 141

Conread position: 15-481
Cow position:
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 228

Conread position: 18-214
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 18-231
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 45

Conread position: 18-468
Cow position:
Alignm length: 470
Alignm identity: 306
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 65, 213

Conread position: 18-478
Cow position:
Alignm length: 488
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 18-479
Cow position:
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 18-479
Cow position:
Alignm length: 493
Alignm identity: 326
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 57

Conread position: 18-480
Cow position:
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 123

Conread position: 18-480
Cow position:
Alignm length: 494
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-480
Cow position:
Alignm length: 491
Alignm identity: 326
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 24

Conread position: 19-219
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 19-231
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 52, 109

Conread position: 19-231
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 19-231
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 19-248
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 161

Conread position: 19-283
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 56

Conread position: 19-286
Cow position:
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-288
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 180

Conread position: 19-288
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 19-293
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 19

Conread position: 19-306
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-336
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 60

Conread position: 19-356
Cow position:
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 187

Conread position: 19-363
Cow position:
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 19-368
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-368
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 309

Conread position: 19-379
Cow position:
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-384
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-407
Cow position:
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-424
Cow position:
Alignm length: 433
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 19-460
Cow position:
Alignm length: 474
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 397

Conread position: 19-463
Cow position:
Alignm length: 474
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 19-468
Cow position:
Alignm length: 478
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 19-472
Cow position:
Alignm length: 484
Alignm identity: 314
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 19

Conread position: 19-472
Cow position:
Alignm length: 487
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-474
Cow position:
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 399

Conread position: 19-477
Cow position:
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 492
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 466

Conread position: 19-478
Cow position:
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 19-478
Cow position:
Alignm length: 486
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 52

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 329

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 90

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 449

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 303

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 387

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 107

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 272

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 53

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position:
Alignm length: 493
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 62

Conread position: 19-482
Cow position:
Alignm length: 496
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-482
Cow position:
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 198

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 289

Conread position: 19-482
Cow position:
Alignm length: 479
Alignm identity: 313
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 48

Conread position: 20-272
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 163

Conread position: 20-317
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 20-362
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 18

Conread position: 20-368
Cow position:
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 216

Conread position: 20-409
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 161

Conread position: 20-453
Cow position:
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 207

Conread position: 20-476
Cow position:
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 20-479
Cow position:
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 18

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 312
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 297

Conread position: 20-479
Cow position:
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 20-480
Cow position:
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 286

Conread position: 20-480
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 202

Conread position: 20-480
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-481
Cow position:
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-481
Cow position:
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 11

Conread position: 20-482
Cow position:
Alignm length: 490
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-482
Cow position:
Alignm length: 491
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 28

Conread position: 20-482
Cow position:
Alignm length: 490
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 21-282
Cow position:
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 21-396
Cow position:
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 21-407
Cow position:
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 130

Conread position: 21-479
Cow position:
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 21-482
Cow position:
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 22-479
Cow position:
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 306

Conread position: 23-377
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 15

Conread position: 23-479
Cow position:
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 394

Conread position: 23-479
Cow position:
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 35

Conread position: 24-281
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 28

Conread position: 24-300
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 42

Conread position: 24-482
Cow position:
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 26-327
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 49

Conread position: 27-230
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 22

Conread position: 28-479
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 34-224
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 45

Conread position: 34-363
Cow position:
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 96

Conread position: 34-478
Cow position:
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 170

Conread position: 34-479
Cow position:
Alignm length: 477
Alignm identity: 319
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 41

Conread position: 35-479
Cow position:
Alignm length: 480
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 38-450
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 38-480
Cow position:
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 25

Conread position: 60-478
Cow position:
Alignm length: 435
Alignm identity: 290
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 12

Conread position: 63-368
Cow position:
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 240

Conread position: 65-339
Cow position:
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 65-449
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 233

Conread position: 65-474
Cow position:
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 65-477
Cow position:
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 127

Conread position: 65-479
Cow position:
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 383

Conread position: 66-290
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 10

Conread position: 66-428
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 13

Conread position: 74-480
Cow position:
Alignm length: 430
Alignm identity: 289
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 90

Conread position: 86-231
Cow position:
Alignm length: 150
Alignm identity: 124
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 86-478
Cow position:
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 80

Conread position: 86-482
Cow position:
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 88

Conread position: 88-292
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 88-479
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 90-292
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 108-479
Cow position:
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 165

Conread position: 121-474
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 131-433
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 175

Conread position: 151-474
Cow position:
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 9

Conread position: 158-479
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 75

Conread position: 161-478
Cow position:
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 164-468
Cow position:
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 299

Conread position: 168-482
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 221

Conread position: 193-482
Cow position:
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 107

Conread position: 239-480
Cow position:
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Show alignments to all cow chromosomes.