Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-344
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 358

Conread position: 1-479
Cow position:
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 297

Conread position: 3-368
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 74

Conread position: 4-234
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 35

Conread position: 14-231
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 147

Conread position: 18-473
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 18-479
Cow position:
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 18-479
Cow position:
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 18-479
Cow position:
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 18-479
Cow position:
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 81

Conread position: 18-479
Cow position:
Alignm length: 487
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 19-147
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 19-183
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 38

Conread position: 19-209
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 19-220
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 199

Conread position: 19-223
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 19-278
Cow position:
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 19-306
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 214

Conread position: 19-356
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-363
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 19

Conread position: 19-403
Cow position:
Alignm length: 404
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 13

Conread position: 19-434
Cow position:
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 348

Conread position: 19-462
Cow position:
Alignm length: 475
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 125

Conread position: 19-465
Cow position:
Alignm length: 473
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 19-466
Cow position:
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 367

Conread position: 19-468
Cow position:
Alignm length: 485
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 175

Conread position: 19-468
Cow position:
Alignm length: 482
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 19-473
Cow position:
Alignm length: 481
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 470

Conread position: 19-476
Cow position:
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 12

Conread position: 19-476
Cow position:
Alignm length: 491
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 39

Conread position: 19-477
Cow position:
Alignm length: 498
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 299

Conread position: 19-477
Cow position:
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 93

Conread position: 19-478
Cow position:
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 92

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 19-478
Cow position:
Alignm length: 493
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 482

Conread position: 19-478
Cow position:
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 298

Conread position: 19-478
Cow position:
Alignm length: 487
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 461

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 44

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 306

Conread position: 19-479
Cow position:
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 135

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 15

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 463

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 285

Conread position: 19-480
Cow position:
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 19-480
Cow position:
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 110

Conread position: 19-480
Cow position:
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 19-480
Cow position:
Alignm length: 491
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 19-480
Cow position:
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 19-480
Cow position:
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 131

Conread position: 19-480
Cow position:
Alignm length: 486
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 109

Conread position: 19-480
Cow position:
Alignm length: 496
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 204

Conread position: 19-480
Cow position:
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 19-481
Cow position:
Alignm length: 490
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 20-288
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 20

Conread position: 20-356
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 20-368
Cow position:
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-428
Cow position:
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 354

Conread position: 20-478
Cow position:
Alignm length: 487
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 136

Conread position: 20-479
Cow position:
Alignm length: 487
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 20-480
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 51

Conread position: 20-480
Cow position:
Alignm length: 480
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 21-302
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 21-325
Cow position:
Alignm length: 318
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 50

Conread position: 21-473
Cow position:
Alignm length: 482
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 21-478
Cow position:
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 348

Conread position: 21-478
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 11

Conread position: 21-478
Cow position:
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 22-479
Cow position:
Alignm length: 496
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 23-448
Cow position:
Alignm length: 447
Alignm identity: 286
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 25

Conread position: 23-479
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 26-367
Cow position:
Alignm length: 361
Alignm identity: 236
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 28

Conread position: 26-481
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 300

Conread position: 27-453
Cow position:
Alignm length: 441
Alignm identity: 274
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 45

Conread position: 34-254
Cow position:
Alignm length: 237
Alignm identity: 185
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 35-481
Cow position:
Alignm length: 472
Alignm identity: 306
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 7, 29

Conread position: 38-275
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 140

Conread position: 38-355
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 27

Conread position: 38-371
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 38-473
Cow position:
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 443

Conread position: 60-480
Cow position:
Alignm length: 456
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 63-479
Cow position:
Alignm length: 446
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 65-407
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 92

Conread position: 65-468
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 56

Conread position: 69-479
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 241

Conread position: 86-262
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 25

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 5

Conread position: 89-480
Cow position:
Alignm length: 401
Alignm identity: 268
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 51, 177

Conread position: 94-474
Cow position:
Alignm length: 402
Alignm identity: 259
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 11

Conread position: 94-477
Cow position:
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 123-468
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 124-479
Cow position:
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 142-479
Cow position:
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 155-479
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 158-480
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 163-478
Cow position:
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 165-480
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 66

Show alignments to all cow chromosomes.