Cow genome map

Conread name: rsag15_c7.y1

Conread position: 14-476
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 15-296
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 95

Conread position: 18-363
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 53

Conread position: 18-459
Cow position:
Alignm length: 471
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 18-473
Cow position:
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 293

Conread position: 18-480
Cow position:
Alignm length: 476
Alignm identity: 312
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 128, 50

Conread position: 19-213
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 52, 73

Conread position: 19-230
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 77

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 19-231
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 152

Conread position: 19-283
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 113

Conread position: 19-357
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 297

Conread position: 19-368
Cow position:
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 310

Conread position: 19-398
Cow position:
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 189

Conread position: 19-449
Cow position:
Alignm length: 461
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 256

Conread position: 19-464
Cow position:
Alignm length: 476
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-466
Cow position:
Alignm length: 475
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-468
Cow position:
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 187

Conread position: 19-474
Cow position:
Alignm length: 488
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-478
Cow position:
Alignm length: 494
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 38

Conread position: 19-478
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 274

Conread position: 19-478
Cow position:
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 92

Conread position: 19-478
Cow position:
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 271

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 26

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-479
Cow position:
Alignm length: 498
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 480
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 352

Conread position: 19-479
Cow position:
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 479
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 111

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 466

Conread position: 19-480
Cow position:
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 460

Conread position: 19-480
Cow position:
Alignm length: 492
Alignm identity: 323
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 124

Conread position: 19-480
Cow position:
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 296

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 19-480
Cow position:
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-481
Cow position:
Alignm length: 494
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 210

Conread position: 19-482
Cow position:
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 443

Conread position: 19-482
Cow position:
Alignm length: 493
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 19-482
Cow position:
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 104

Conread position: 20-231
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 105

Conread position: 20-231
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 37

Conread position: 20-350
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 51, 40

Conread position: 20-352
Cow position:
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 20-473
Cow position:
Alignm length: 475
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 20-477
Cow position:
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 80

Conread position: 20-479
Cow position:
Alignm length: 495
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 55

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 21-472
Cow position:
Alignm length: 485
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 22-208
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 140

Conread position: 23-213
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 56

Conread position: 27-477
Cow position:
Alignm length: 457
Alignm identity: 305
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 119, 44

Conread position: 28-479
Cow position:
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 29-468
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 118

Conread position: 36-197
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 65

Conread position: 36-301
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 197, 45

Conread position: 38-478
Cow position:
Alignm length: 470
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 38-480
Cow position:
Alignm length: 476
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 280

Conread position: 59-348
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 90

Conread position: 64-479
Cow position:
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 84-479
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 15

Conread position: 86-300
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 86-477
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 77

Conread position: 88-479
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 394

Conread position: 88-479
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 9

Conread position: 113-482
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 162

Conread position: 115-479
Cow position:
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 122-479
Cow position:
Alignm length: 379
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 141-476
Cow position:
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 142-481
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 344

Conread position: 159-479
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 159-481
Cow position:
Alignm length: 335
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 223

Conread position: 186-480
Cow position:
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 194-478
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 118

Conread position: 199-479
Cow position:
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.