Cow genome map
Conread name: | rsag15_c7.y1 |
Conread position: | 1-472 |
Cow position: | chr18:16392632-16392137 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 336 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 19, 88 |
Conread position: | 1-475 |
Cow position: | chr18:4947421-4947917 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 14-475 |
Cow position: | chr18:51274601-51274111 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 31 |
Conread position: | 18-479 |
Cow position: | chr18:14131878-14132364 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 189 |
Conread position: | 19-172 |
Cow position: | chr18:52652396-52652562 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-231 |
Cow position: | chr18:37157742-37157516 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 46, 29 |
Conread position: | 19-231 |
Cow position: | chr18:56014069-56014284 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 140 |
Conread position: | 19-232 |
Cow position: | chr18:54022646-54022422 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 47, 193 |
Conread position: | 19-308 |
Cow position: | chr18:41839321-41839027 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 209 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 52, 38 |
Conread position: | 19-350 |
Cow position: | chr18:35054613-35054964 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-356 |
Cow position: | chr18:28972401-28972040 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 19-363 |
Cow position: | chr18:16089603-16089973 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-366 |
Cow position: | chr18:51461567-51461194 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 19-368 |
Cow position: | chr18:51695185-51695558 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 361 |
Conread position: | 19-457 |
Cow position: | chr18:51343171-51343635 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 24 |
Conread position: | 19-475 |
Cow position: | chr18:54170023-54169544 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 199 |
Conread position: | 19-478 |
Cow position: | chr18:19485626-19486119 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 114 |
Conread position: | 19-479 |
Cow position: | chr18:14417452-14417943 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr18:16175135-16174647 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 413 |
Conread position: | 19-479 |
Cow position: | chr18:19353850-19354341 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr18:23799133-23799618 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 186 |
Conread position: | 19-479 |
Cow position: | chr18:27988670-27989160 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr18:29865126-29864637 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 19-479 |
Cow position: | chr18:33270402-33270870 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 85 |
Conread position: | 19-479 |
Cow position: | chr18:37490314-37490795 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 271 |
Conread position: | 19-479 |
Cow position: | chr18:47742989-47743465 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 215 |
Conread position: | 19-479 |
Cow position: | chr18:51593483-51593963 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 319 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 48, 112 |
Conread position: | 19-479 |
Cow position: | chr18:54004689-54004204 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 175 |
Conread position: | 19-480 |
Cow position: | chr18:5534494-5534981 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 176 |
Conread position: | 19-481 |
Cow position: | chr18:25352747-25353237 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 20-231 |
Cow position: | chr18:36110627-36110405 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 54, 14 |
Conread position: | 20-288 |
Cow position: | chr18:26245138-26244844 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 221 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 20-351 |
Cow position: | chr18:56485169-56484810 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 257 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 45, 190 |
Conread position: | 20-387 |
Cow position: | chr18:2646037-2645679 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 250 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 129, 45 |
Conread position: | 20-477 |
Cow position: | chr18:37663810-37664260 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 309 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 47, 18 |
Conread position: | 20-478 |
Cow position: | chr18:36510101-36510591 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 213 |
Conread position: | 20-478 |
Cow position: | chr18:37507445-37507936 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 20-478 |
Cow position: | chr18:51482343-51482827 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 51 |
Conread position: | 20-479 |
Cow position: | chr18:29238380-29238859 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 143 |
Conread position: | 21-231 |
Cow position: | chr18:38342807-38342595 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 49, 87 |
Conread position: | 21-367 |
Cow position: | chr18:40315945-40315595 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 238 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 88, 44 |
Conread position: | 22-475 |
Cow position: | chr18:15856704-15857159 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 317 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 123, 43 |
Conread position: | 23-480 |
Cow position: | chr18:25364654-25365143 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 269 |
Conread position: | 27-453 |
Cow position: | chr18:35373271-35372817 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 317 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 38, 14 |
Conread position: | 27-479 |
Cow position: | chr18:24617629-24618107 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 29-299 |
Cow position: | chr18:33752193-33752485 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 29-482 |
Cow position: | chr18:32769224-32769701 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 318 |
Conread position: | 48-479 |
Cow position: | chr18:25921908-25922360 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 430 |
Conread position: | 63-368 |
Cow position: | chr18:27538393-27538721 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 115-479 |
Cow position: | chr18:40482586-40482970 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 191 |
Conread position: | 136-479 |
Cow position: | chr18:11273247-11272884 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 162 |
Conread position: | 136-479 |
Cow position: | chr18:32166313-32165955 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 194 |
Conread position: | 142-448 |
Cow position: | chr18:48469561-48469235 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 229 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 19, 174 |
Conread position: | 148-474 |
Cow position: | chr18:19336208-19336551 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 219 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 155-478 |
Cow position: | chr18:52654448-52654785 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 148 |
Conread position: | 160-482 |
Cow position: | chr18:40344729-40344419 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 72 |
Conread position: | 167-479 |
Cow position: | chr18:16147343-16147039 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 212 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 51, 70 |
Conread position: | 177-481 |
Cow position: | chr18:23660846-23660525 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.