Cow genome map
| Conread name: | rsag15_c7.y1 |
| Conread position: | 1-367 |
| Cow position: | chr19:35107318-35106935 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 5-476 |
| Cow position: | chr19:48860284-48859784 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 6-468 |
| Cow position: | chr19:265129-265615 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 14-327 |
| Cow position: | chr19:5249250-5248922 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 159 |
| Conread position: | 17-356 |
| Cow position: | chr19:16128645-16129017 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 263 |
| Conread position: | 18-231 |
| Cow position: | chr19:40816022-40815797 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 18-331 |
| Cow position: | chr19:437952-437613 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-466 |
| Cow position: | chr19:32139896-32139432 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 266 |
| Conread position: | 18-479 |
| Cow position: | chr19:39096934-39097390 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 70 |
| Conread position: | 19-231 |
| Cow position: | chr19:32210587-32210361 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-387 |
| Cow position: | chr19:161646-161262 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 19-449 |
| Cow position: | chr19:16319141-16318680 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-457 |
| Cow position: | chr19:23400736-23400295 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 19-464 |
| Cow position: | chr19:28580184-28579702 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 19-475 |
| Cow position: | chr19:20106214-20106701 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-477 |
| Cow position: | chr19:4387100-4387576 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 19-478 |
| Cow position: | chr19:1587753-1587259 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 19-479 |
| Cow position: | chr19:774092-774583 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-479 |
| Cow position: | chr19:2272621-2272141 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 19-479 |
| Cow position: | chr19:5730343-5730819 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 80 |
| Conread position: | 19-479 |
| Cow position: | chr19:5900021-5899531 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 289 |
| Conread position: | 19-479 |
| Cow position: | chr19:7343558-7344046 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 19-479 |
| Cow position: | chr19:28595024-28595517 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 472 |
| Conread position: | 19-479 |
| Cow position: | chr19:33874903-33875390 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-479 |
| Cow position: | chr19:33943059-33943546 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 19-479 |
| Cow position: | chr19:39184053-39183565 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 19-479 |
| Cow position: | chr19:52150194-52149703 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-480 |
| Cow position: | chr19:173746-174239 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-480 |
| Cow position: | chr19:205995-206478 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 431 |
| Conread position: | 19-480 |
| Cow position: | chr19:39392007-39392489 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 19-481 |
| Cow position: | chr19:40886246-40885762 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 167 |
| Conread position: | 19-482 |
| Cow position: | chr19:166640-166150 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 19-482 |
| Cow position: | chr19:1583739-1584236 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 19-482 |
| Cow position: | chr19:12774592-12775086 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-482 |
| Cow position: | chr19:27036137-27035673 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 20-222 |
| Cow position: | chr19:50724043-50724253 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 20-468 |
| Cow position: | chr19:40850970-40850500 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 20-474 |
| Cow position: | chr19:3174878-3175336 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 47, 213 |
| Conread position: | 20-474 |
| Cow position: | chr19:28405220-28404761 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 20-479 |
| Cow position: | chr19:39667049-39666576 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 21-195 |
| Cow position: | chr19:256755-256940 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 21-287 |
| Cow position: | chr19:39788-40078 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 21-478 |
| Cow position: | chr19:376222-375745 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 131 |
| Conread position: | 21-479 |
| Cow position: | chr19:892145-891660 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 28-482 |
| Cow position: | chr19:28367448-28367922 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 50 |
| Conread position: | 38-473 |
| Cow position: | chr19:32204776-32205229 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 65-479 |
| Cow position: | chr19:40471147-40470723 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 86-479 |
| Cow position: | chr19:342799-343226 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 325 |
| Conread position: | 92-378 |
| Cow position: | chr19:42582885-42582587 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 124-479 |
| Cow position: | chr19:3139573-3139942 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 184 |
| Conread position: | 146-482 |
| Cow position: | chr19:30453726-30453374 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 302 |
| Conread position: | 155-482 |
| Cow position: | chr19:43146296-43146639 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 269 |
| Conread position: | 159-406 |
| Cow position: | chr19:14159521-14159267 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 209 |
| Conread position: | 159-476 |
| Cow position: | chr19:547947-547606 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 250 |
| Conread position: | 172-331 |
| Cow position: | chr19:256942-257111 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 129 |
| Conread position: | 195-477 |
| Cow position: | chr19:32468581-32468880 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.