Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-339
Cow position: chr2:36277501-36277147 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 14

Conread position: 4-478
Cow position: chr2:53330711-53331219 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 4-479
Cow position: chr2:50324012-50324496 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 159

Conread position: 11-474
Cow position: chr2:3788957-3788475 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 324
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 33

Conread position: 15-479
Cow position: chr2:74112872-74112411 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 307
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 78

Conread position: 18-147
Cow position: chr2:5869421-5869292 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-231
Cow position: chr2:33794935-33794715 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 20

Conread position: 18-356
Cow position: chr2:2411852-2411494 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 18-479
Cow position: chr2:6005915-6005427 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 266

Conread position: 18-479
Cow position: chr2:14823979-14824449 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 20

Conread position: 18-481
Cow position: chr2:32458129-32457638 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 18-482
Cow position: chr2:47602334-47601841 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 19-164
Cow position: chr2:41154749-41154907 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 19-185
Cow position: chr2:17424790-17424970 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 19-201
Cow position: chr2:1691898-1692088 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 19

Conread position: 19-228
Cow position: chr2:25743474-25743692 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 44

Conread position: 19-231
Cow position: chr2:51988856-51988631 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 29

Conread position: 19-243
Cow position: chr2:54408689-54408468 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 62

Conread position: 19-251
Cow position: chr2:2206881-2206645 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 60

Conread position: 19-288
Cow position: chr2:45967101-45966817 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 136

Conread position: 19-321
Cow position: chr2:49628708-49629017 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 140

Conread position: 19-324
Cow position: chr2:3323634-3323303 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-368
Cow position: chr2:78743499-78743860 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 19-389
Cow position: chr2:36029457-36029058 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 53

Conread position: 19-421
Cow position: chr2:39690839-39691259 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 146

Conread position: 19-431
Cow position: chr2:11730702-11731124 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 19-432
Cow position: chr2:56801712-56801306 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 285
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 105

Conread position: 19-444
Cow position: chr2:20891893-20891448 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 19-449
Cow position: chr2:57336477-57336936 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 432

Conread position: 19-452
Cow position: chr2:24925500-24925960 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 216

Conread position: 19-464
Cow position: chr2:12223346-12222871 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-469
Cow position: chr2:34052089-34052574 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-474
Cow position: chr2:16074604-16074123 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 269

Conread position: 19-474
Cow position: chr2:32656576-32657051 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 19-475
Cow position: chr2:32065106-32064628 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 375

Conread position: 19-476
Cow position: chr2:16283265-16283707 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 19

Conread position: 19-477
Cow position: chr2:281753-281266 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 208

Conread position: 19-478
Cow position: chr2:6962444-6962932 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 106

Conread position: 19-478
Cow position: chr2:10185295-10184805 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 19-478
Cow position: chr2:19012294-19012777 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-478
Cow position: chr2:24471700-24471213 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 293

Conread position: 19-478
Cow position: chr2:80291832-80291346 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 427

Conread position: 19-479
Cow position: chr2:174633-174145 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 267

Conread position: 19-479
Cow position: chr2:4402219-4401729 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 19-479
Cow position: chr2:8119475-8119964 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-479
Cow position: chr2:9908845-9909345 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position: chr2:9958142-9957651 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position: chr2:10264475-10263994 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 205

Conread position: 19-479
Cow position: chr2:11158188-11157699 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 19-479
Cow position: chr2:12696536-12696045 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position: chr2:14209891-14209401 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 19-479
Cow position: chr2:19225805-19226282 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 67

Conread position: 19-479
Cow position: chr2:24926349-24926836 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 216

Conread position: 19-479
Cow position: chr2:25028366-25027884 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 19-479
Cow position: chr2:25887618-25887132 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 464

Conread position: 19-479
Cow position: chr2:26922358-26922849 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position: chr2:28648673-28648187 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-479
Cow position: chr2:36981321-36981807 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 19-479
Cow position: chr2:39422556-39423045 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 286

Conread position: 19-479
Cow position: chr2:44934055-44933585 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 261

Conread position: 19-479
Cow position: chr2:47037502-47037010 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 19-479
Cow position: chr2:50982209-50981727 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 19-479
Cow position: chr2:52063691-52064177 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 176

Conread position: 19-479
Cow position: chr2:52617407-52617897 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position: chr2:53540870-53541361 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-479
Cow position: chr2:55483218-55482759 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-479
Cow position: chr2:65937301-65936806 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-480
Cow position: chr2:574521-575008 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 299

Conread position: 19-480
Cow position: chr2:13044781-13044285 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 19-480
Cow position: chr2:16901188-16901675 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 411

Conread position: 19-480
Cow position: chr2:22078834-22079319 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 380

Conread position: 19-480
Cow position: chr2:51618191-51618660 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 19-480
Cow position: chr2:56888669-56889160 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 40

Conread position: 19-480
Cow position: chr2:81258108-81258599 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 306

Conread position: 19-481
Cow position: chr2:364136-363644 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position: chr2:26904825-26904352 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 199

Conread position: 19-481
Cow position: chr2:41687699-41688191 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position: chr2:47811781-47812273 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 258

Conread position: 19-482
Cow position: chr2:10610714-10610220 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-482
Cow position: chr2:25766935-25767412 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 46

Conread position: 19-482
Cow position: chr2:35356935-35357400 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 20-208
Cow position: chr2:44990373-44990167 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 20-321
Cow position: chr2:11499794-11500094 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 47

Conread position: 20-330
Cow position: chr2:34563742-34563405 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 298

Conread position: 20-368
Cow position: chr2:15575919-15575541 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 20-465
Cow position: chr2:28794173-28794652 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 459

Conread position: 20-475
Cow position: chr2:5903410-5902929 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 20-479
Cow position: chr2:42669774-42669282 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 310

Conread position: 20-479
Cow position: chr2:47526430-47525947 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 20-479
Cow position: chr2:50078500-50078980 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 154

Conread position: 20-479
Cow position: chr2:54738421-54738904 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 271

Conread position: 20-481
Cow position: chr2:20872552-20872089 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 21-339
Cow position: chr2:31448776-31449111 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 44

Conread position: 21-464
Cow position: chr2:54693882-54694343 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 21-481
Cow position: chr2:72688542-72689031 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 22-474
Cow position: chr2:32434387-32433913 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 91

Conread position: 23-357
Cow position: chr2:11693414-11693764 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 113

Conread position: 23-475
Cow position: chr2:33089018-33089461 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 25

Conread position: 23-478
Cow position: chr2:905202-905686 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 23-479
Cow position: chr2:36052089-36051603 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 36

Conread position: 23-479
Cow position: chr2:38374715-38375182 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 317
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 293

Conread position: 23-479
Cow position: chr2:64768257-64767783 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 291

Conread position: 24-314
Cow position: chr2:12363049-12362730 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 26-258
Cow position: chr2:42331945-42331705 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 53

Conread position: 27-476
Cow position: chr2:72187559-72187093 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 413

Conread position: 28-205
Cow position: chr2:63291039-63290856 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 5

Conread position: 29-472
Cow position: chr2:28639905-28639425 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 29-480
Cow position: chr2:72681178-72680715 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 34-296
Cow position: chr2:16291630-16291918 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 34-482
Cow position: chr2:9189081-9188626 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 87

Conread position: 38-295
Cow position: chr2:44650206-44650481 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 67

Conread position: 38-480
Cow position: chr2:45938746-45938280 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 48-480
Cow position: chr2:13553528-13553990 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 49-480
Cow position: chr2:62729477-62729933 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 114

Conread position: 59-217
Cow position: chr2:81504245-81504411 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 5

Conread position: 63-475
Cow position: chr2:10731884-10731444 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 63-477
Cow position: chr2:2087191-2086749 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 65-200
Cow position: chr2:31300121-31300267 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 72

Conread position: 65-399
Cow position: chr2:42361289-42360928 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 165

Conread position: 65-480
Cow position: chr2:246899-246471 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 68-482
Cow position: chr2:41181098-41181522 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 300

Conread position: 70-428
Cow position: chr2:73193953-73194343 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 12, 150

Conread position: 86-282
Cow position: chr2:51397966-51397763 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 153

Conread position: 86-284
Cow position: chr2:12328135-12328357 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 48

Conread position: 86-368
Cow position: chr2:43445972-43446266 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 98

Conread position: 86-475
Cow position: chr2:59412709-59412310 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 229

Conread position: 86-479
Cow position: chr2:12479261-12478839 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 358

Conread position: 86-479
Cow position: chr2:32639949-32640362 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 333

Conread position: 86-481
Cow position: chr2:780403-779990 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 183

Conread position: 88-479
Cow position: chr2:11558856-11559271 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 90-479
Cow position: chr2:78763688-78764074 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 91-474
Cow position: chr2:72906201-72905803 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 228

Conread position: 92-235
Cow position: chr2:62727576-62727723 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 94-459
Cow position: chr2:37789000-37788622 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 268

Conread position: 105-479
Cow position: chr2:48815307-48815688 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 90

Conread position: 108-480
Cow position: chr2:18242874-18242482 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 228

Conread position: 117-470
Cow position: chr2:6880408-6880770 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 332

Conread position: 120-273
Cow position: chr2:41763298-41763144 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 108

Conread position: 122-463
Cow position: chr2:34594924-34594579 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 110, 30

Conread position: 126-479
Cow position: chr2:41047982-41047607 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 135-448
Cow position: chr2:33082909-33082578 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 250

Conread position: 138-480
Cow position: chr2:11682210-11682568 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 170

Conread position: 142-479
Cow position: chr2:5869066-5868712 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 147-479
Cow position: chr2:210970-210635 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 233

Conread position: 152-478
Cow position: chr2:44092448-44092780 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 158-399
Cow position: chr2:53005163-53004905 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 158-451
Cow position: chr2:45677575-45677888 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 160-477
Cow position: chr2:975600-975263 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 299

Conread position: 170-368
Cow position: chr2:41155010-41155227 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 118

Conread position: 178-474
Cow position: chr2:25022004-25022317 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 244

Conread position: 179-482
Cow position: chr2:49303190-49302871 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 194-421
Cow position: chr2:67188728-67188970 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 100

Show alignments to all cow chromosomes.