Cow genome map
Conread name: | rsag15_c7.y1 |
Conread position: | 16-480 |
Cow position: | chr20:18967942-18968420 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 324 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 13, 50 |
Conread position: | 18-142 |
Cow position: | chr20:14869128-14869002 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 69, 53 |
Conread position: | 18-368 |
Cow position: | chr20:9344408-9344770 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 18-479 |
Cow position: | chr20:10853895-10853419 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 45 |
Conread position: | 18-482 |
Cow position: | chr20:15096445-15095954 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 466 |
Conread position: | 19-190 |
Cow position: | chr20:9520687-9520518 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 144 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 44, 56 |
Conread position: | 19-283 |
Cow position: | chr20:21395367-21395650 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 130 |
Conread position: | 19-288 |
Cow position: | chr20:27870657-27870952 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 224 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 48, 60 |
Conread position: | 19-368 |
Cow position: | chr20:21717874-21718257 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 372 |
Conread position: | 19-391 |
Cow position: | chr20:5466465-5466859 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 263 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 82, 68 |
Conread position: | 19-449 |
Cow position: | chr20:28162274-28162735 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 19-478 |
Cow position: | chr20:9547101-9547585 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 13 |
Conread position: | 19-479 |
Cow position: | chr20:5536393-5536872 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 411 |
Conread position: | 19-479 |
Cow position: | chr20:8972728-8972231 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr20:13764345-13764836 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 29 |
Conread position: | 19-479 |
Cow position: | chr20:15293431-15293921 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 56 |
Conread position: | 19-479 |
Cow position: | chr20:19439365-19439855 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 56 |
Conread position: | 19-479 |
Cow position: | chr20:21916086-21916577 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 56 |
Conread position: | 19-479 |
Cow position: | chr20:26054241-26053751 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 338 |
Conread position: | 19-479 |
Cow position: | chr20:27338650-27339083 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 38 |
Conread position: | 19-479 |
Cow position: | chr20:30687025-30687517 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 365 |
Conread position: | 19-479 |
Cow position: | chr20:41364187-41363705 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 34 |
Conread position: | 19-480 |
Cow position: | chr20:29949978-29950465 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 392 |
Conread position: | 19-480 |
Cow position: | chr20:30429720-30430211 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 19-481 |
Cow position: | chr20:12436972-12436458 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 19-481 |
Cow position: | chr20:24615443-24614967 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 34 |
Conread position: | 19-481 |
Cow position: | chr20:35126110-35126598 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 260 |
Conread position: | 19-482 |
Cow position: | chr20:824220-824710 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 19 |
Conread position: | 19-482 |
Cow position: | chr20:20753353-20752881 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 133 |
Conread position: | 20-218 |
Cow position: | chr20:18323505-18323304 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 85, 51 |
Conread position: | 20-231 |
Cow position: | chr20:12569953-12570183 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 20-479 |
Cow position: | chr20:17660291-17659803 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 20-479 |
Cow position: | chr20:23468212-23467728 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 18 |
Conread position: | 20-479 |
Cow position: | chr20:23800337-23800825 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 21 |
Conread position: | 20-482 |
Cow position: | chr20:5937701-5937238 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 301 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 56, 161 |
Conread position: | 20-482 |
Cow position: | chr20:25849371-25848889 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 68 |
Conread position: | 21-196 |
Cow position: | chr20:19356218-19356398 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 140 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 50, 87 |
Conread position: | 21-479 |
Cow position: | chr20:13769309-13769779 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 325 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 50, 18 |
Conread position: | 22-306 |
Cow position: | chr20:16178311-16178022 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 206 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 54, 150 |
Conread position: | 26-479 |
Cow position: | chr20:13793486-13793958 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 49 |
Conread position: | 33-479 |
Cow position: | chr20:20441488-20441011 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 34-231 |
Cow position: | chr20:30386615-30386404 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 152 |
Conread position: | 59-479 |
Cow position: | chr20:37581671-37582105 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 63-477 |
Cow position: | chr20:35018444-35018869 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 78 |
Conread position: | 64-292 |
Cow position: | chr20:13499606-13499855 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 64-453 |
Cow position: | chr20:15066949-15067361 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 252 |
Conread position: | 81-341 |
Cow position: | chr20:2785291-2785036 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 182 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 67, 169 |
Conread position: | 86-478 |
Cow position: | chr20:28564056-28563637 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 87-479 |
Cow position: | chr20:13678319-13677909 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 300 |
Conread position: | 105-368 |
Cow position: | chr20:12041969-12042246 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 209 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 44, 77 |
Conread position: | 105-479 |
Cow position: | chr20:25899233-25899628 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 108-475 |
Cow position: | chr20:10101469-10101087 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 81 |
Conread position: | 118-475 |
Cow position: | chr20:19341385-19341761 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 103 |
Conread position: | 125-473 |
Cow position: | chr20:19214544-19214902 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 206 |
Conread position: | 161-405 |
Cow position: | chr20:9533406-9533660 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 195 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 72, 100 |
Conread position: | 161-479 |
Cow position: | chr20:16178143-16177809 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 200 |
Conread position: | 167-471 |
Cow position: | chr20:14868742-14868437 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 79 |
Show alignments to all cow chromosomes.