Cow genome map

Conread name: rsag15_c7.y1

Conread position: 16-480
Cow position: chr20:18967942-18968420 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 50

Conread position: 18-142
Cow position: chr20:14869128-14869002 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 53

Conread position: 18-368
Cow position: chr20:9344408-9344770 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 18-479
Cow position: chr20:10853895-10853419 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 45

Conread position: 18-482
Cow position: chr20:15096445-15095954 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 466

Conread position: 19-190
Cow position: chr20:9520687-9520518 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 56

Conread position: 19-283
Cow position: chr20:21395367-21395650 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 19-288
Cow position: chr20:27870657-27870952 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 48, 60

Conread position: 19-368
Cow position: chr20:21717874-21718257 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 372

Conread position: 19-391
Cow position: chr20:5466465-5466859 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 68

Conread position: 19-449
Cow position: chr20:28162274-28162735 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 19-478
Cow position: chr20:9547101-9547585 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 13

Conread position: 19-479
Cow position: chr20:5536393-5536872 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 411

Conread position: 19-479
Cow position: chr20:8972728-8972231 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position: chr20:13764345-13764836 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 19-479
Cow position: chr20:15293431-15293921 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-479
Cow position: chr20:19439365-19439855 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-479
Cow position: chr20:21916086-21916577 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-479
Cow position: chr20:26054241-26053751 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 338

Conread position: 19-479
Cow position: chr20:27338650-27339083 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 19-479
Cow position: chr20:30687025-30687517 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 365

Conread position: 19-479
Cow position: chr20:41364187-41363705 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 19-480
Cow position: chr20:29949978-29950465 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 392

Conread position: 19-480
Cow position: chr20:30429720-30430211 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-481
Cow position: chr20:12436972-12436458 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 19-481
Cow position: chr20:24615443-24614967 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 19-481
Cow position: chr20:35126110-35126598 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 260

Conread position: 19-482
Cow position: chr20:824220-824710 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-482
Cow position: chr20:20753353-20752881 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 133

Conread position: 20-218
Cow position: chr20:18323505-18323304 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 51

Conread position: 20-231
Cow position: chr20:12569953-12570183 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 20-479
Cow position: chr20:17660291-17659803 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-479
Cow position: chr20:23468212-23467728 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 20-479
Cow position: chr20:23800337-23800825 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 20-482
Cow position: chr20:5937701-5937238 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 301
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 161

Conread position: 20-482
Cow position: chr20:25849371-25848889 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 68

Conread position: 21-196
Cow position: chr20:19356218-19356398 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 87

Conread position: 21-479
Cow position: chr20:13769309-13769779 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 18

Conread position: 22-306
Cow position: chr20:16178311-16178022 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 150

Conread position: 26-479
Cow position: chr20:13793486-13793958 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 33-479
Cow position: chr20:20441488-20441011 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 34-231
Cow position: chr20:30386615-30386404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 152

Conread position: 59-479
Cow position: chr20:37581671-37582105 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 63-477
Cow position: chr20:35018444-35018869 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 78

Conread position: 64-292
Cow position: chr20:13499606-13499855 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 64-453
Cow position: chr20:15066949-15067361 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 252

Conread position: 81-341
Cow position: chr20:2785291-2785036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 169

Conread position: 86-478
Cow position: chr20:28564056-28563637 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 87-479
Cow position: chr20:13678319-13677909 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 300

Conread position: 105-368
Cow position: chr20:12041969-12042246 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 77

Conread position: 105-479
Cow position: chr20:25899233-25899628 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 108-475
Cow position: chr20:10101469-10101087 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 81

Conread position: 118-475
Cow position: chr20:19341385-19341761 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 103

Conread position: 125-473
Cow position: chr20:19214544-19214902 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 206

Conread position: 161-405
Cow position: chr20:9533406-9533660 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 100

Conread position: 161-479
Cow position: chr20:16178143-16177809 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 200

Conread position: 167-471
Cow position: chr20:14868742-14868437 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 79

Show alignments to all cow chromosomes.