Cow genome map
| Conread name: | rsag15_c7.y1 |
| Conread position: | 17-479 |
| Cow position: | chr23:28304299-28304792 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 18-479 |
| Cow position: | chr23:11714481-11713989 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 18-480 |
| Cow position: | chr23:4639206-4638720 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 18-481 |
| Cow position: | chr23:2759286-2759777 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-185 |
| Cow position: | chr23:19949200-19949021 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-213 |
| Cow position: | chr23:2718699-2718907 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-231 |
| Cow position: | chr23:38691877-38692103 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-275 |
| Cow position: | chr23:618086-617829 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 72 |
| Conread position: | 19-288 |
| Cow position: | chr23:22168032-22168321 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 19-292 |
| Cow position: | chr23:4513870-4514168 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-308 |
| Cow position: | chr23:16613787-16613500 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 19-395 |
| Cow position: | chr23:23172164-23172569 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-453 |
| Cow position: | chr23:36029992-36029531 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 305 |
| Conread position: | 19-467 |
| Cow position: | chr23:15218495-15218023 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 19-477 |
| Cow position: | chr23:4818413-4818895 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 19-478 |
| Cow position: | chr23:28218811-28219311 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-478 |
| Cow position: | chr23:31648641-31648160 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 404 |
| Conread position: | 19-479 |
| Cow position: | chr23:965109-964625 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 338 |
| Conread position: | 19-479 |
| Cow position: | chr23:2793871-2793394 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 19-479 |
| Cow position: | chr23:7044795-7044334 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 19-479 |
| Cow position: | chr23:11780169-11780665 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 448 |
| Conread position: | 19-479 |
| Cow position: | chr23:14972583-14972080 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 456 |
| Conread position: | 19-479 |
| Cow position: | chr23:15178458-15178940 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 19-479 |
| Cow position: | chr23:15526963-15527457 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-479 |
| Cow position: | chr23:22145920-22145429 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 297 |
| Conread position: | 19-479 |
| Cow position: | chr23:31164191-31164678 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 19-479 |
| Cow position: | chr23:32351376-32350885 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-480 |
| Cow position: | chr23:5873186-5872694 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-480 |
| Cow position: | chr23:7314296-7314788 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-480 |
| Cow position: | chr23:41141841-41141349 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-481 |
| Cow position: | chr23:1957554-1958038 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 472 |
| Conread position: | 19-481 |
| Cow position: | chr23:2439876-2439408 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 19-481 |
| Cow position: | chr23:13512491-13512952 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 19-481 |
| Cow position: | chr23:21821904-21821449 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 19-482 |
| Cow position: | chr23:4890076-4890562 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 19-482 |
| Cow position: | chr23:20154840-20154352 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 395 |
| Conread position: | 20-147 |
| Cow position: | chr23:23282607-23282732 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 20-228 |
| Cow position: | chr23:4361387-4361599 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 20-477 |
| Cow position: | chr23:2025693-2025206 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 191 |
| Conread position: | 20-478 |
| Cow position: | chr23:3879699-3879210 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 20-479 |
| Cow position: | chr23:19490942-19491427 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 20-480 |
| Cow position: | chr23:1012416-1011944 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 20-481 |
| Cow position: | chr23:1022569-1022081 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 460 |
| Conread position: | 21-216 |
| Cow position: | chr23:2342469-2342675 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 21-421 |
| Cow position: | chr23:26838209-26838646 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 401 |
| Conread position: | 21-479 |
| Cow position: | chr23:30563803-30564281 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 314 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 23-478 |
| Cow position: | chr23:16497854-16497378 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 30-474 |
| Cow position: | chr23:17878357-17877878 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 32-479 |
| Cow position: | chr23:4435051-4435530 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 307 |
| Conread position: | 34-481 |
| Cow position: | chr23:16055172-16055652 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 272 |
| Conread position: | 39-475 |
| Cow position: | chr23:38579113-38579544 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 38 |
| Conread position: | 40-473 |
| Cow position: | chr23:22942563-22942115 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 31, 387 |
| Conread position: | 48-293 |
| Cow position: | chr23:8287355-8287624 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 257 |
| Conread position: | 63-479 |
| Cow position: | chr23:608148-608589 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 63-479 |
| Cow position: | chr23:14961514-14961075 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 86-209 |
| Cow position: | chr23:21243274-21243147 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 88-299 |
| Cow position: | chr23:25677829-25677613 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 91-479 |
| Cow position: | chr23:22369633-22369234 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 178 |
| Conread position: | 124-480 |
| Cow position: | chr23:23283025-23283409 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 142-482 |
| Cow position: | chr23:3707925-3708282 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 174 |
| Conread position: | 147-478 |
| Cow position: | chr23:29478739-29479083 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 150-482 |
| Cow position: | chr23:11074947-11074607 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 82, 214 |
| Conread position: | 163-479 |
| Cow position: | chr23:2342659-2342971 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 41 |
Show alignments to all cow chromosomes.