Cow genome map
Conread name: | rsag15_c7.y1 |
Conread position: | 1-479 |
Cow position: | chr24:8150856-8150355 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 337 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 25, 38 |
Conread position: | 1-480 |
Cow position: | chr24:4414084-4413593 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 14 |
Conread position: | 13-474 |
Cow position: | chr24:40101435-40100958 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 18 |
Conread position: | 18-241 |
Cow position: | chr24:6142551-6142778 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 67, 20 |
Conread position: | 18-326 |
Cow position: | chr24:6036464-6036797 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 18-482 |
Cow position: | chr24:6130286-6130770 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 57 |
Conread position: | 19-201 |
Cow position: | chr24:14389062-14388873 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 52, 100 |
Conread position: | 19-217 |
Cow position: | chr24:11151761-11151549 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 165 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 19-217 |
Cow position: | chr24:16083305-16083093 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 164 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-231 |
Cow position: | chr24:6435959-6436185 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-241 |
Cow position: | chr24:6407511-6407745 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 48, 38 |
Conread position: | 19-254 |
Cow position: | chr24:12699348-12699099 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 155 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-288 |
Cow position: | chr24:8606292-8606591 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 225 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-299 |
Cow position: | chr24:310343-310649 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-319 |
Cow position: | chr24:44018984-44019310 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-321 |
Cow position: | chr24:12569503-12569821 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 60, 15 |
Conread position: | 19-350 |
Cow position: | chr24:6323879-6323518 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 19-368 |
Cow position: | chr24:6023612-6023238 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 279 |
Conread position: | 19-368 |
Cow position: | chr24:9545531-9545906 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 12 |
Conread position: | 19-407 |
Cow position: | chr24:38639002-38639422 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 60 |
Conread position: | 19-473 |
Cow position: | chr24:7089514-7089045 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 37 |
Conread position: | 19-473 |
Cow position: | chr24:13179543-13179064 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 19-476 |
Cow position: | chr24:6353609-6354098 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 169 |
Conread position: | 19-477 |
Cow position: | chr24:7063018-7063504 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 153 |
Conread position: | 19-478 |
Cow position: | chr24:9090578-9090095 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 122 |
Conread position: | 19-478 |
Cow position: | chr24:16560838-16560344 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 149 |
Conread position: | 19-478 |
Cow position: | chr24:38585642-38585170 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 68 |
Conread position: | 19-479 |
Cow position: | chr24:147136-146643 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr24:12149819-12149323 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 56 |
Conread position: | 19-479 |
Cow position: | chr24:13044152-13043662 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 423 |
Conread position: | 19-479 |
Cow position: | chr24:14755474-14755965 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr24:17322168-17322642 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 230 |
Conread position: | 19-479 |
Cow position: | chr24:23504384-23503893 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 19-479 |
Cow position: | chr24:29188770-29189253 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 19 |
Conread position: | 19-479 |
Cow position: | chr24:33934864-33935354 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 19 |
Conread position: | 19-480 |
Cow position: | chr24:19834880-19835367 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 340 |
Conread position: | 19-481 |
Cow position: | chr24:12087675-12088167 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 480 |
Conread position: | 19-481 |
Cow position: | chr24:41003962-41004456 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 480 |
Conread position: | 20-147 |
Cow position: | chr24:25437760-25437892 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 20-169 |
Cow position: | chr24:14277740-14277593 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 20-284 |
Cow position: | chr24:36723300-36723594 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 216 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 20-300 |
Cow position: | chr24:5991749-5991443 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 229 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 20-368 |
Cow position: | chr24:12204863-12204494 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 24 |
Conread position: | 20-403 |
Cow position: | chr24:12238761-12239178 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 312 |
Conread position: | 20-473 |
Cow position: | chr24:22321207-22321694 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 309 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 47, 28 |
Conread position: | 20-479 |
Cow position: | chr24:6963274-6962784 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 20-479 |
Cow position: | chr24:13233735-13234214 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 138 |
Conread position: | 20-479 |
Cow position: | chr24:22972539-22973031 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 56 |
Conread position: | 21-478 |
Cow position: | chr24:36558073-36557604 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 131 |
Conread position: | 22-388 |
Cow position: | chr24:29352369-29351985 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 258 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 43, 53 |
Conread position: | 23-421 |
Cow position: | chr24:35869090-35868681 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 98 |
Conread position: | 23-453 |
Cow position: | chr24:42584280-42583822 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 309 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 58, 135 |
Conread position: | 24-462 |
Cow position: | chr24:19702974-19703436 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 118 |
Conread position: | 26-476 |
Cow position: | chr24:36298900-36299372 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 81 |
Conread position: | 27-447 |
Cow position: | chr24:12108068-12107632 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 433 |
Conread position: | 27-479 |
Cow position: | chr24:38289279-38288829 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 39 |
Conread position: | 28-468 |
Cow position: | chr24:12127623-12127155 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 29-479 |
Cow position: | chr24:12334245-12333772 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 272 |
Conread position: | 35-480 |
Cow position: | chr24:14383136-14382663 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 269 |
Conread position: | 38-476 |
Cow position: | chr24:6668249-6667800 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 310 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 38-479 |
Cow position: | chr24:6337879-6338349 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 8 |
Conread position: | 54-478 |
Cow position: | chr24:17958034-17957565 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 68-251 |
Cow position: | chr24:19641243-19641436 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 161 |
Conread position: | 69-478 |
Cow position: | chr24:19469072-19468643 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 76 |
Conread position: | 72-231 |
Cow position: | chr24:36711436-36711603 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 122 |
Conread position: | 87-479 |
Cow position: | chr24:20286362-20285946 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 88-475 |
Cow position: | chr24:13322384-13322792 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 279 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 27, 146 |
Conread position: | 142-479 |
Cow position: | chr24:40468781-40469140 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 147-481 |
Cow position: | chr24:12163848-12164193 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 165 |
Conread position: | 158-479 |
Cow position: | chr24:23094396-23094064 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 310 |
Conread position: | 159-473 |
Cow position: | chr24:25438231-25438561 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 314 |
Conread position: | 160-473 |
Cow position: | chr24:39492001-39491675 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 224 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 70, 113 |
Conread position: | 167-478 |
Cow position: | chr24:39405078-39404747 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 232 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 63, 108 |
Conread position: | 169-449 |
Cow position: | chr24:24074637-24074349 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 38, 43 |
Conread position: | 171-478 |
Cow position: | chr24:30447653-30447967 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 54, 44 |
Show alignments to all cow chromosomes.