Cow genome map
Conread name: | rsag15_c7.y1 |
Conread position: | 18-361 |
Cow position: | chr28:21566892-21567252 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 249 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 91, 47 |
Conread position: | 19-147 |
Cow position: | chr28:10067895-10067765 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 11, 57 |
Conread position: | 19-167 |
Cow position: | chr28:2117414-2117573 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-169 |
Cow position: | chr28:14752220-14752384 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 19-213 |
Cow position: | chr28:5567568-5567767 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 19-228 |
Cow position: | chr28:9180052-9180267 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 165 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 46, 60 |
Conread position: | 19-231 |
Cow position: | chr28:22041850-22041624 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 172 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-256 |
Cow position: | chr28:5112689-5112438 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 150 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-288 |
Cow position: | chr28:5803457-5803748 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 206 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 48, 208 |
Conread position: | 19-403 |
Cow position: | chr28:698716-699125 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 24 |
Conread position: | 19-428 |
Cow position: | chr28:7827425-7827853 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 112 |
Conread position: | 19-460 |
Cow position: | chr28:12648239-12647788 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 70 |
Conread position: | 19-468 |
Cow position: | chr28:34595667-34596146 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 356 |
Conread position: | 19-474 |
Cow position: | chr28:14194116-14193651 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 311 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 138, 52 |
Conread position: | 19-475 |
Cow position: | chr28:1216396-1215917 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 387 |
Conread position: | 19-478 |
Cow position: | chr28:7741870-7742352 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 52 |
Conread position: | 19-478 |
Cow position: | chr28:8380472-8380962 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 391 |
Conread position: | 19-478 |
Cow position: | chr28:10615567-10615082 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 215 |
Conread position: | 19-478 |
Cow position: | chr28:17665872-17665402 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 208 |
Conread position: | 19-478 |
Cow position: | chr28:24590292-24590781 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 56 |
Conread position: | 19-479 |
Cow position: | chr28:484158-483668 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr28:1385970-1385486 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 52 |
Conread position: | 19-479 |
Cow position: | chr28:1459530-1460021 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-479 |
Cow position: | chr28:1506302-1506789 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 38 |
Conread position: | 19-479 |
Cow position: | chr28:1813494-1813014 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 206 |
Conread position: | 19-479 |
Cow position: | chr28:2085900-2086387 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 465 |
Conread position: | 19-479 |
Cow position: | chr28:3190817-3190326 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr28:5938923-5939407 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 396 |
Conread position: | 19-479 |
Cow position: | chr28:6537375-6536877 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 19-479 |
Cow position: | chr28:6778503-6778015 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 19-479 |
Cow position: | chr28:8719517-8719039 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 60 |
Conread position: | 19-479 |
Cow position: | chr28:10580438-10579949 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 55 |
Conread position: | 19-479 |
Cow position: | chr28:12151765-12152246 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 346 |
Conread position: | 19-479 |
Cow position: | chr28:12408790-12408297 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr28:14703950-14703458 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 415 |
Conread position: | 19-479 |
Cow position: | chr28:17381436-17380947 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 98 |
Conread position: | 19-479 |
Cow position: | chr28:17389837-17390329 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr28:18519012-18518517 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr28:26424823-26424335 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 19-480 |
Cow position: | chr28:22259715-22259230 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 306 |
Conread position: | 19-480 |
Cow position: | chr28:32790956-32790472 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 111 |
Conread position: | 19-480 |
Cow position: | chr28:33637977-33638465 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 380 |
Conread position: | 19-481 |
Cow position: | chr28:1954795-1955283 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-482 |
Cow position: | chr28:33253744-33254232 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 302 |
Conread position: | 20-169 |
Cow position: | chr28:10460171-10460017 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 20-301 |
Cow position: | chr28:18146304-18146011 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 203 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 47, 18 |
Conread position: | 20-393 |
Cow position: | chr28:29821435-29821828 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 67 |
Conread position: | 20-453 |
Cow position: | chr28:5799727-5800196 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 207 |
Conread position: | 20-476 |
Cow position: | chr28:24669038-24669519 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 178 |
Conread position: | 20-478 |
Cow position: | chr28:5766167-5766665 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 55 |
Conread position: | 20-479 |
Cow position: | chr28:1166453-1165972 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 459 |
Conread position: | 20-479 |
Cow position: | chr28:7003434-7003922 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 466 |
Conread position: | 20-479 |
Cow position: | chr28:10471101-10471578 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 230 |
Conread position: | 20-479 |
Cow position: | chr28:11504796-11504315 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 39 |
Conread position: | 20-480 |
Cow position: | chr28:15034675-15034185 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 55 |
Conread position: | 23-480 |
Cow position: | chr28:15587515-15587991 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 314 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 46, 144 |
Conread position: | 23-480 |
Cow position: | chr28:18100056-18099587 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 320 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 48, 124 |
Conread position: | 23-482 |
Cow position: | chr28:784101-784586 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 297 |
Conread position: | 25-368 |
Cow position: | chr28:6786699-6787042 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 124 |
Conread position: | 26-479 |
Cow position: | chr28:29337941-29338409 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 313 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 39, 12 |
Conread position: | 27-453 |
Cow position: | chr28:5814676-5815109 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 83 |
Conread position: | 31-461 |
Cow position: | chr28:24559052-24559508 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 306 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 53, 121 |
Conread position: | 34-478 |
Cow position: | chr28:21360947-21361417 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 78 |
Conread position: | 35-304 |
Cow position: | chr28:11489424-11489134 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 199 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 36-478 |
Cow position: | chr28:9288402-9288872 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 38-480 |
Cow position: | chr28:13461425-13461887 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 315 |
Conread position: | 38-481 |
Cow position: | chr28:5750249-5749776 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 377 |
Conread position: | 57-412 |
Cow position: | chr28:25760944-25761321 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 345 |
Conread position: | 59-479 |
Cow position: | chr28:7059186-7058742 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 50 |
Conread position: | 59-479 |
Cow position: | chr28:10496013-10495575 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 49 |
Conread position: | 65-480 |
Cow position: | chr28:7811899-7812344 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 86-350 |
Cow position: | chr28:10645923-10645646 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 44 |
Conread position: | 86-479 |
Cow position: | chr28:22231776-22231366 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 90 |
Conread position: | 88-480 |
Cow position: | chr28:23023743-23024146 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Conread position: | 90-290 |
Cow position: | chr28:22236518-22236310 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 143 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 91-482 |
Cow position: | chr28:15684983-15685403 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 408 |
Conread position: | 95-479 |
Cow position: | chr28:7028259-7027857 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 266 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 53, 17 |
Conread position: | 110-347 |
Cow position: | chr28:9295815-9295570 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 47, 17 |
Conread position: | 114-453 |
Cow position: | chr28:32359030-32359375 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 239 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 57, 23 |
Conread position: | 121-479 |
Cow position: | chr28:10067511-10067139 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 121-479 |
Cow position: | chr28:31591106-31591483 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 322 |
Conread position: | 142-478 |
Cow position: | chr28:34202082-34201734 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 238 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 15, 260 |
Conread position: | 147-478 |
Cow position: | chr28:29253214-29253571 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 233 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 10, 289 |
Conread position: | 159-479 |
Cow position: | chr28:24884443-24884771 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 153 |
Conread position: | 160-479 |
Cow position: | chr28:6350414-6350752 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 226 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 54, 244 |
Conread position: | 160-480 |
Cow position: | chr28:1772978-1773299 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 234 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 73, 27 |
Conread position: | 163-301 |
Cow position: | chr28:2117587-2117737 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 163-394 |
Cow position: | chr28:7828185-7828420 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 130 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 195-479 |
Cow position: | chr28:15998728-15999029 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.