Cow genome map
Conread name: | rsag15_c7.y1 |
Conread position: | 2-471 |
Cow position: | chr29:19954006-19954487 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 7 |
Conread position: | 11-476 |
Cow position: | chr29:2948983-2948486 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 21 |
Conread position: | 15-390 |
Cow position: | chr29:31547280-31546886 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 258 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 104, 68 |
Conread position: | 15-481 |
Cow position: | chr29:32892177-32892660 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 23 |
Conread position: | 18-185 |
Cow position: | chr29:18855547-18855366 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 18-361 |
Cow position: | chr29:36634974-36634617 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 47 |
Conread position: | 18-444 |
Cow position: | chr29:30259140-30258692 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 305 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 63, 96 |
Conread position: | 18-479 |
Cow position: | chr29:7845788-7846280 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 19-147 |
Cow position: | chr29:3328738-3328876 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-157 |
Cow position: | chr29:42093164-42093315 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-211 |
Cow position: | chr29:42938793-42938597 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 146 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 48, 137 |
Conread position: | 19-231 |
Cow position: | chr29:29502860-29502634 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 180 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-301 |
Cow position: | chr29:15997251-15996959 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 206 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 52, 38 |
Conread position: | 19-311 |
Cow position: | chr29:16661407-16661714 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 219 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 86, 44 |
Conread position: | 19-358 |
Cow position: | chr29:5958977-5959339 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 19-368 |
Cow position: | chr29:14112946-14113313 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 266 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 62, 46 |
Conread position: | 19-369 |
Cow position: | chr29:42803795-42804166 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 19-370 |
Cow position: | chr29:45461146-45461522 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 56 |
Conread position: | 19-372 |
Cow position: | chr29:27979521-27979142 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 184 |
Conread position: | 19-476 |
Cow position: | chr29:40501599-40501124 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 19 |
Conread position: | 19-478 |
Cow position: | chr29:19888986-19889471 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 296 |
Conread position: | 19-479 |
Cow position: | chr29:647213-647697 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 19-479 |
Cow position: | chr29:2691562-2692052 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 19-479 |
Cow position: | chr29:2839943-2839451 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 353 |
Conread position: | 19-479 |
Cow position: | chr29:6264601-6264113 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 466 |
Conread position: | 19-479 |
Cow position: | chr29:7429725-7429230 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 19-479 |
Cow position: | chr29:9641387-9640894 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 19-479 |
Cow position: | chr29:10022933-10022442 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-479 |
Cow position: | chr29:13622459-13621968 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-479 |
Cow position: | chr29:13851474-13850992 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 247 |
Conread position: | 19-479 |
Cow position: | chr29:19526887-19526396 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 19-479 |
Cow position: | chr29:19655023-19655508 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 19-479 |
Cow position: | chr29:21431452-21430965 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 29 |
Conread position: | 19-479 |
Cow position: | chr29:26163435-26162946 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 339 |
Conread position: | 19-479 |
Cow position: | chr29:27180354-27179863 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 19-479 |
Cow position: | chr29:31182807-31183292 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 97 |
Conread position: | 19-479 |
Cow position: | chr29:32558352-32557862 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 454 |
Conread position: | 19-479 |
Cow position: | chr29:37165492-37165957 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 314 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 68, 46 |
Conread position: | 19-479 |
Cow position: | chr29:38228377-38228865 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 422 |
Conread position: | 19-479 |
Cow position: | chr29:39078312-39077822 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 360 |
Conread position: | 19-479 |
Cow position: | chr29:43324922-43325404 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 19 |
Conread position: | 19-480 |
Cow position: | chr29:409849-409371 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 133 |
Conread position: | 19-480 |
Cow position: | chr29:2101238-2101729 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 310 |
Conread position: | 19-480 |
Cow position: | chr29:10822517-10822030 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 198 |
Conread position: | 19-480 |
Cow position: | chr29:14210149-14209661 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 19-480 |
Cow position: | chr29:16023963-16024454 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 40 |
Conread position: | 19-481 |
Cow position: | chr29:8664912-8665395 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 29 |
Conread position: | 19-481 |
Cow position: | chr29:34798412-34797919 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 299 |
Conread position: | 19-481 |
Cow position: | chr29:38207265-38206773 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 450 |
Conread position: | 19-482 |
Cow position: | chr29:5236420-5236916 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 483 |
Conread position: | 19-482 |
Cow position: | chr29:13583480-13583974 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 41 |
Conread position: | 20-453 |
Cow position: | chr29:3176033-3175593 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 315 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 129, 19 |
Conread position: | 20-476 |
Cow position: | chr29:15946419-15945931 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 31 |
Conread position: | 20-478 |
Cow position: | chr29:5981308-5980822 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 149 |
Conread position: | 20-479 |
Cow position: | chr29:14587319-14587814 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 20-479 |
Cow position: | chr29:19621877-19621377 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 20-479 |
Cow position: | chr29:35298310-35298800 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 20-480 |
Cow position: | chr29:16345614-16346091 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 22 |
Conread position: | 20-482 |
Cow position: | chr29:4633224-4632752 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 63 |
Conread position: | 22-428 |
Cow position: | chr29:23977525-23977962 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 23-241 |
Cow position: | chr29:14084722-14084494 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 178 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 24-479 |
Cow position: | chr29:47050-46572 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 8 |
Conread position: | 27-231 |
Cow position: | chr29:27262309-27262087 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 168 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 29-479 |
Cow position: | chr29:609230-608758 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 15 |
Conread position: | 34-480 |
Cow position: | chr29:13018112-13018580 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 452 |
Conread position: | 35-479 |
Cow position: | chr29:801172-800723 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 323 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 36, 99 |
Conread position: | 36-476 |
Cow position: | chr29:2747043-2746559 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 406 |
Conread position: | 38-478 |
Cow position: | chr29:32541515-32541984 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 38-479 |
Cow position: | chr29:32287668-32288136 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 159 |
Conread position: | 43-479 |
Cow position: | chr29:32038286-32038718 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 296 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 24, 170 |
Conread position: | 53-482 |
Cow position: | chr29:16172666-16172216 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 116 |
Conread position: | 63-422 |
Cow position: | chr29:45205970-45206363 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 127 |
Conread position: | 65-482 |
Cow position: | chr29:20252619-20253058 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 22 |
Conread position: | 67-481 |
Cow position: | chr29:27812547-27812975 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 69-480 |
Cow position: | chr29:34874499-34874915 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 172 |
Conread position: | 86-478 |
Cow position: | chr29:45624865-45625277 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 70 |
Conread position: | 86-479 |
Cow position: | chr29:25931048-25930629 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 325 |
Conread position: | 87-479 |
Cow position: | chr29:2465402-2464987 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 367 |
Conread position: | 87-479 |
Cow position: | chr29:3401412-3401008 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 264 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 22, 325 |
Conread position: | 88-482 |
Cow position: | chr29:29704190-29703770 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 289 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 21, 333 |
Conread position: | 104-479 |
Cow position: | chr29:6874375-6873984 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 84 |
Conread position: | 126-479 |
Cow position: | chr29:252480-252847 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 247 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 142-480 |
Cow position: | chr29:9082350-9081995 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 26 |
Conread position: | 146-479 |
Cow position: | chr29:17406665-17407014 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 53 |
Conread position: | 154-400 |
Cow position: | chr29:42204645-42204905 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 178 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 158-482 |
Cow position: | chr29:17151799-17152147 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 234 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 160-480 |
Cow position: | chr29:10645856-10645520 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 171-476 |
Cow position: | chr29:21422130-21421811 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 119 |
Show alignments to all cow chromosomes.