Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-352
Cow position:
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 298

Conread position: 3-482
Cow position:
Alignm length: 508
Alignm identity: 329
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 73

Conread position: 11-479
Cow position:
Alignm length: 497
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 14-231
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 15-479
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 8

Conread position: 17-479
Cow position:
Alignm length: 495
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 18-292
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 53

Conread position: 18-452
Cow position:
Alignm length: 482
Alignm identity: 320
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 210

Conread position: 18-478
Cow position:
Alignm length: 487
Alignm identity: 309
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 53

Conread position: 18-478
Cow position:
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 18-479
Cow position:
Alignm length: 493
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 18-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 18-479
Cow position:
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 97

Conread position: 18-479
Cow position:
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 18-480
Cow position:
Alignm length: 494
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 18-482
Cow position:
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 48

Conread position: 19-164
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 19-201
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 19-216
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 19-217
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 19

Conread position: 19-231
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 72, 52

Conread position: 19-299
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 55

Conread position: 19-326
Cow position:
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-347
Cow position:
Alignm length: 355
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 52, 341

Conread position: 19-350
Cow position:
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 19-353
Cow position:
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 52

Conread position: 19-357
Cow position:
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 202

Conread position: 19-369
Cow position:
Alignm length: 377
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-385
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 115

Conread position: 19-388
Cow position:
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 270

Conread position: 19-405
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 19-459
Cow position:
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 19-465
Cow position:
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 120

Conread position: 19-472
Cow position:
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 19-472
Cow position:
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 107

Conread position: 19-474
Cow position:
Alignm length: 488
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 19-476
Cow position:
Alignm length: 490
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 19-476
Cow position:
Alignm length: 479
Alignm identity: 318
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 180

Conread position: 19-477
Cow position:
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-477
Cow position:
Alignm length: 490
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 137

Conread position: 19-477
Cow position:
Alignm length: 475
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 92

Conread position: 19-477
Cow position:
Alignm length: 502
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 353

Conread position: 19-478
Cow position:
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 149

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 355

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 94

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 464

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 13

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 187

Conread position: 19-479
Cow position:
Alignm length: 480
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 231

Conread position: 19-479
Cow position:
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 224

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 354

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 195

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 262

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 413

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 188

Conread position: 19-479
Cow position:
Alignm length: 507
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 19

Conread position: 19-480
Cow position:
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 176

Conread position: 19-480
Cow position:
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 57

Conread position: 19-480
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 325

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 406

Conread position: 19-481
Cow position:
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-481
Cow position:
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 37

Conread position: 19-482
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 293

Conread position: 19-482
Cow position:
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 19-482
Cow position:
Alignm length: 498
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-482
Cow position:
Alignm length: 499
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 20-243
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 102

Conread position: 20-247
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 224

Conread position: 20-478
Cow position:
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 20-478
Cow position:
Alignm length: 487
Alignm identity: 321
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 15

Conread position: 20-478
Cow position:
Alignm length: 471
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 430

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 285

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 264

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 313

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 190

Conread position: 20-480
Cow position:
Alignm length: 490
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 51

Conread position: 20-480
Cow position:
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 20-481
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 55

Conread position: 21-346
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 21-402
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 58

Conread position: 21-444
Cow position:
Alignm length: 463
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 132

Conread position: 21-464
Cow position:
Alignm length: 475
Alignm identity: 313
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 257

Conread position: 22-231
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 22-482
Cow position:
Alignm length: 491
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 23-251
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 42

Conread position: 23-451
Cow position:
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 23-479
Cow position:
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 23-480
Cow position:
Alignm length: 481
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 39

Conread position: 24-478
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 172

Conread position: 26-471
Cow position:
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 383

Conread position: 29-321
Cow position:
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 31-461
Cow position:
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 50

Conread position: 32-473
Cow position:
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 442

Conread position: 34-308
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 132, 37

Conread position: 38-366
Cow position:
Alignm length: 335
Alignm identity: 215
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 75

Conread position: 38-482
Cow position:
Alignm length: 463
Alignm identity: 285
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 25

Conread position: 41-479
Cow position:
Alignm length: 473
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 63-477
Cow position:
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 52

Conread position: 65-479
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 66-435
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 16

Conread position: 86-479
Cow position:
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 318

Conread position: 86-479
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 90

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 86-479
Cow position:
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 140

Conread position: 87-345
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 108-473
Cow position:
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 108-479
Cow position:
Alignm length: 392
Alignm identity: 263
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 198

Conread position: 116-363
Cow position:
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 126-391
Cow position:
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 19

Conread position: 131-394
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 212

Conread position: 135-479
Cow position:
Alignm length: 363
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 233

Conread position: 147-481
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 158-479
Cow position:
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 158-479
Cow position:
Alignm length: 339
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 160-466
Cow position:
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 241

Conread position: 160-479
Cow position:
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 164-479
Cow position:
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 166-479
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 131

Conread position: 171-478
Cow position:
Alignm length: 323
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 127

Show alignments to all cow chromosomes.