Cow genome map

Conread name: rsag15_c7.y1

Conread position: 14-320
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 100, 9

Conread position: 14-480
Cow position:
Alignm length: 501
Alignm identity: 330
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 64

Conread position: 16-482
Cow position:
Alignm length: 497
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 18-299
Cow position:
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 18-299
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 18-468
Cow position:
Alignm length: 465
Alignm identity: 299
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 68

Conread position: 18-476
Cow position:
Alignm length: 484
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 18-479
Cow position:
Alignm length: 492
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 307

Conread position: 18-479
Cow position:
Alignm length: 487
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 19-213
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 19-229
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 102

Conread position: 19-229
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 111

Conread position: 19-234
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 48, 227

Conread position: 19-312
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-347
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 315

Conread position: 19-368
Cow position:
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 198

Conread position: 19-419
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 162

Conread position: 19-426
Cow position:
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 53

Conread position: 19-429
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 19

Conread position: 19-432
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 89, 44

Conread position: 19-449
Cow position:
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 328

Conread position: 19-464
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 291

Conread position: 19-475
Cow position:
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 500
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 288

Conread position: 19-479
Cow position:
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 19-479
Cow position:
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 320
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 43

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 306

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 341

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 295

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 444

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 422

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 354

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 109

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 19-479
Cow position:
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 282

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 207

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-479
Cow position:
Alignm length: 480
Alignm identity: 309
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 62

Conread position: 19-480
Cow position:
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 19-480
Cow position:
Alignm length: 494
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 331

Conread position: 19-480
Cow position:
Alignm length: 496
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 217

Conread position: 19-481
Cow position:
Alignm length: 494
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 53

Conread position: 19-482
Cow position:
Alignm length: 490
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 52

Conread position: 19-482
Cow position:
Alignm length: 494
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 267

Conread position: 19-482
Cow position:
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 12

Conread position: 20-219
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 147

Conread position: 20-357
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 17

Conread position: 20-462
Cow position:
Alignm length: 475
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 55

Conread position: 20-473
Cow position:
Alignm length: 480
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 332

Conread position: 20-478
Cow position:
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 20-479
Cow position:
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 101

Conread position: 20-479
Cow position:
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 21-479
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 391

Conread position: 21-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 426

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 21-480
Cow position:
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 404

Conread position: 23-213
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 48

Conread position: 27-241
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 21

Conread position: 29-479
Cow position:
Alignm length: 475
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 49

Conread position: 29-482
Cow position:
Alignm length: 479
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 140

Conread position: 32-480
Cow position:
Alignm length: 480
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 33-482
Cow position:
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 38-479
Cow position:
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 38-479
Cow position:
Alignm length: 473
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 415

Conread position: 38-480
Cow position:
Alignm length: 460
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 38-482
Cow position:
Alignm length: 473
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 39-479
Cow position:
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 39-479
Cow position:
Alignm length: 471
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 63-479
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 9

Conread position: 65-466
Cow position:
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 42

Conread position: 72-479
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 79-475
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 86-350
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 86-478
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 19

Conread position: 86-479
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 36

Conread position: 88-394
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 206

Conread position: 89-479
Cow position:
Alignm length: 400
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 90-481
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 229

Conread position: 91-479
Cow position:
Alignm length: 413
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 94-351
Cow position:
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 98-479
Cow position:
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 207

Conread position: 105-426
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 126-479
Cow position:
Alignm length: 375
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 276

Conread position: 131-479
Cow position:
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 233

Conread position: 147-473
Cow position:
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 172

Conread position: 158-453
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 158-479
Cow position:
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 159-480
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 163-453
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 131

Conread position: 164-482
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 285

Conread position: 168-474
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 179

Conread position: 193-479
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.