Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-420
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 137, 12

Conread position: 1-461
Cow position:
Alignm length: 478
Alignm identity: 322
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 44

Conread position: 14-480
Cow position:
Alignm length: 480
Alignm identity: 309
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 62

Conread position: 14-480
Cow position:
Alignm length: 495
Alignm identity: 323
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 186

Conread position: 18-347
Cow position:
Alignm length: 343
Alignm identity: 225
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 283

Conread position: 18-380
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 46

Conread position: 18-453
Cow position:
Alignm length: 459
Alignm identity: 288
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 59

Conread position: 18-477
Cow position:
Alignm length: 494
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 283

Conread position: 18-477
Cow position:
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 291

Conread position: 18-478
Cow position:
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 19-174
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 66, 12

Conread position: 19-177
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 19-224
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 19

Conread position: 19-228
Cow position:
Alignm length: 224
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 19-231
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 19

Conread position: 19-275
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 210

Conread position: 19-284
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 53

Conread position: 19-288
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 23

Conread position: 19-299
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 58

Conread position: 19-299
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 68

Conread position: 19-362
Cow position:
Alignm length: 357
Alignm identity: 233
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 19

Conread position: 19-363
Cow position:
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 339

Conread position: 19-365
Cow position:
Alignm length: 373
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-368
Cow position:
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-395
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 52

Conread position: 19-403
Cow position:
Alignm length: 409
Alignm identity: 270
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 19

Conread position: 19-405
Cow position:
Alignm length: 409
Alignm identity: 278
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 81, 52

Conread position: 19-431
Cow position:
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 353

Conread position: 19-449
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 19-451
Cow position:
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 153

Conread position: 19-453
Cow position:
Alignm length: 466
Alignm identity: 313
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 61, 317

Conread position: 19-453
Cow position:
Alignm length: 467
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-462
Cow position:
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 95

Conread position: 19-468
Cow position:
Alignm length: 481
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 297

Conread position: 19-474
Cow position:
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 335

Conread position: 19-477
Cow position:
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 500
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 148

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 38

Conread position: 19-478
Cow position:
Alignm length: 485
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-478
Cow position:
Alignm length: 484
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 53

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 140

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 114

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 297

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 464

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 152

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 263

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 395

Conread position: 19-479
Cow position:
Alignm length: 472
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 87

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 206

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 481
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 19-479
Cow position:
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 231

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 117

Conread position: 19-480
Cow position:
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 19-480
Cow position:
Alignm length: 485
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 92

Conread position: 19-480
Cow position:
Alignm length: 489
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 109

Conread position: 19-480
Cow position:
Alignm length: 495
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 19-480
Cow position:
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 13

Conread position: 19-481
Cow position:
Alignm length: 500
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 423

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 414

Conread position: 19-482
Cow position:
Alignm length: 478
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 13

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 20-146
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 20-203
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 20-274
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 212

Conread position: 20-299
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 195

Conread position: 20-301
Cow position:
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 209

Conread position: 20-356
Cow position:
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 12

Conread position: 20-477
Cow position:
Alignm length: 500
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 329

Conread position: 20-478
Cow position:
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 386

Conread position: 20-478
Cow position:
Alignm length: 481
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 42

Conread position: 20-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-479
Cow position:
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 20-479
Cow position:
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 237

Conread position: 20-479
Cow position:
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 20-479
Cow position:
Alignm length: 508
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 20-480
Cow position:
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 19

Conread position: 20-480
Cow position:
Alignm length: 496
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 20-482
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 119

Conread position: 20-482
Cow position:
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 37

Conread position: 21-147
Cow position:
Alignm length: 134
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 36

Conread position: 21-479
Cow position:
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 252

Conread position: 21-481
Cow position:
Alignm length: 488
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 47

Conread position: 22-479
Cow position:
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 60

Conread position: 23-428
Cow position:
Alignm length: 421
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 36

Conread position: 23-479
Cow position:
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 19

Conread position: 23-480
Cow position:
Alignm length: 475
Alignm identity: 316
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 56

Conread position: 23-482
Cow position:
Alignm length: 478
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 33-480
Cow position:
Alignm length: 479
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 34-463
Cow position:
Alignm length: 461
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 103

Conread position: 35-377
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 33

Conread position: 38-474
Cow position:
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 61-459
Cow position:
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 63-251
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 9

Conread position: 63-479
Cow position:
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 63-479
Cow position:
Alignm length: 454
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 63-480
Cow position:
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 164

Conread position: 63-481
Cow position:
Alignm length: 448
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 65-473
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 86-231
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 84

Conread position: 86-363
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 86-431
Cow position:
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 349

Conread position: 86-479
Cow position:
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 99-428
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 156

Conread position: 115-357
Cow position:
Alignm length: 260
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 124-478
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 118

Conread position: 128-473
Cow position:
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 358

Conread position: 130-477
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 151

Conread position: 131-436
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 178

Conread position: 151-480
Cow position:
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 158-408
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 158-479
Cow position:
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 205

Conread position: 174-478
Cow position:
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 182

Show alignments to all cow chromosomes.