Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-231
Cow position:
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 1-478
Cow position:
Alignm length: 500
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 301

Conread position: 4-482
Cow position:
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 14-478
Cow position:
Alignm length: 487
Alignm identity: 308
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 231

Conread position: 15-480
Cow position:
Alignm length: 492
Alignm identity: 317
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 19

Conread position: 18-241
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 18-327
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 13

Conread position: 18-327
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 13

Conread position: 18-482
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 423

Conread position: 19-164
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 19-172
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 19-217
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 18

Conread position: 19-229
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 47, 60

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 19-231
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 48, 211

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 19-283
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 56

Conread position: 19-284
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 90

Conread position: 19-339
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 301

Conread position: 19-339
Cow position:
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-345
Cow position:
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-357
Cow position:
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 161

Conread position: 19-368
Cow position:
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 295

Conread position: 19-389
Cow position:
Alignm length: 403
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-403
Cow position:
Alignm length: 417
Alignm identity: 289
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 26

Conread position: 19-406
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 19-419
Cow position:
Alignm length: 432
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 289

Conread position: 19-423
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 129, 28

Conread position: 19-428
Cow position:
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 19

Conread position: 19-428
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-448
Cow position:
Alignm length: 463
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 121

Conread position: 19-454
Cow position:
Alignm length: 444
Alignm identity: 289
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 90, 15

Conread position: 19-454
Cow position:
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 292

Conread position: 19-457
Cow position:
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 19-457
Cow position:
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 425

Conread position: 19-458
Cow position:
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-465
Cow position:
Alignm length: 476
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 423

Conread position: 19-473
Cow position:
Alignm length: 479
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 49

Conread position: 19-473
Cow position:
Alignm length: 483
Alignm identity: 303
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 67

Conread position: 19-476
Cow position:
Alignm length: 482
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 19-477
Cow position:
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-477
Cow position:
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 19-477
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 19-478
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 453

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 202

Conread position: 19-478
Cow position:
Alignm length: 488
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 430

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 462

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 213

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 298

Conread position: 19-479
Cow position:
Alignm length: 486
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 297

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 194

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 387

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 320

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 336

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 19-479
Cow position:
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 122

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 140

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 214

Conread position: 19-479
Cow position:
Alignm length: 509
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 113

Conread position: 19-480
Cow position:
Alignm length: 485
Alignm identity: 316
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 33

Conread position: 19-480
Cow position:
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 390

Conread position: 19-480
Cow position:
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 175

Conread position: 19-480
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 19-481
Cow position:
Alignm length: 495
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 19-481
Cow position:
Alignm length: 492
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 19-481
Cow position:
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 19-482
Cow position:
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 214

Conread position: 20-306
Cow position:
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 20-457
Cow position:
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 296

Conread position: 20-468
Cow position:
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 20-476
Cow position:
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 84

Conread position: 20-479
Cow position:
Alignm length: 497
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 20-479
Cow position:
Alignm length: 494
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 20-479
Cow position:
Alignm length: 492
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 258

Conread position: 20-480
Cow position:
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 100

Conread position: 20-481
Cow position:
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 20-482
Cow position:
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 21-367
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 21-479
Cow position:
Alignm length: 490
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 21-480
Cow position:
Alignm length: 491
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 23-478
Cow position:
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 23-479
Cow position:
Alignm length: 488
Alignm identity: 323
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 378

Conread position: 24-479
Cow position:
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 31-479
Cow position:
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 32-481
Cow position:
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 273

Conread position: 33-481
Cow position:
Alignm length: 464
Alignm identity: 309
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 24

Conread position: 63-212
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 94

Conread position: 63-479
Cow position:
Alignm length: 435
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 65-479
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 65-480
Cow position:
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 69-459
Cow position:
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 69-474
Cow position:
Alignm length: 429
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 134

Conread position: 74-477
Cow position:
Alignm length: 431
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 334

Conread position: 79-231
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 86-477
Cow position:
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 226

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 87-479
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 334

Conread position: 88-478
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 91-482
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 110-231
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 113-427
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 128

Conread position: 123-480
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 179

Conread position: 123-481
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 125-474
Cow position:
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 9

Conread position: 128-478
Cow position:
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 129-479
Cow position:
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 130-479
Cow position:
Alignm length: 371
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 142-480
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 158-407
Cow position:
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 158-455
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 45

Conread position: 158-479
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 75, 230

Conread position: 162-478
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 179-340
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.