Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-403
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 62

Conread position: 18-250
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 92

Conread position: 18-357
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 20

Conread position: 18-477
Cow position:
Alignm length: 494
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 294

Conread position: 18-479
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 48

Conread position: 18-481
Cow position:
Alignm length: 501
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 19-177
Cow position:
Alignm length: 170
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 19-231
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 19-231
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 25

Conread position: 19-288
Cow position:
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-350
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 89, 47

Conread position: 19-355
Cow position:
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 19-368
Cow position:
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-402
Cow position:
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-453
Cow position:
Alignm length: 466
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-457
Cow position:
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-462
Cow position:
Alignm length: 472
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 19-472
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 474

Conread position: 19-476
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-477
Cow position:
Alignm length: 490
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 150

Conread position: 19-478
Cow position:
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-478
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 90

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 178

Conread position: 19-478
Cow position:
Alignm length: 489
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 19-478
Cow position:
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 120

Conread position: 19-478
Cow position:
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 333

Conread position: 19-478
Cow position:
Alignm length: 493
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-478
Cow position:
Alignm length: 486
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 393

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 413

Conread position: 19-479
Cow position:
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 187

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 120

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 286

Conread position: 19-479
Cow position:
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 265

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 328

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 402

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 477

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 297

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 286

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 286

Conread position: 19-480
Cow position:
Alignm length: 494
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-480
Cow position:
Alignm length: 489
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 19-480
Cow position:
Alignm length: 490
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 19-480
Cow position:
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 19-481
Cow position:
Alignm length: 498
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-481
Cow position:
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 177

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-482
Cow position:
Alignm length: 496
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 269

Conread position: 19-482
Cow position:
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 178

Conread position: 19-482
Cow position:
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 19-482
Cow position:
Alignm length: 499
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-482
Cow position:
Alignm length: 495
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 58

Conread position: 20-321
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 125

Conread position: 20-340
Cow position:
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-350
Cow position:
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 20-450
Cow position:
Alignm length: 462
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 146

Conread position: 20-474
Cow position:
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 20-475
Cow position:
Alignm length: 490
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 51

Conread position: 20-476
Cow position:
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 20-477
Cow position:
Alignm length: 501
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 51

Conread position: 20-477
Cow position:
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 20-478
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 20-478
Cow position:
Alignm length: 497
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 20-478
Cow position:
Alignm length: 491
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 20-479
Cow position:
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 470

Conread position: 21-480
Cow position:
Alignm length: 498
Alignm identity: 324
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 117, 50

Conread position: 21-481
Cow position:
Alignm length: 502
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 21-481
Cow position:
Alignm length: 478
Alignm identity: 312
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 201, 12

Conread position: 22-389
Cow position:
Alignm length: 393
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 23-252
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 25

Conread position: 23-345
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 42

Conread position: 23-357
Cow position:
Alignm length: 352
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 56

Conread position: 23-481
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 44, 87

Conread position: 24-305
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 145

Conread position: 26-474
Cow position:
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 196

Conread position: 29-231
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 42

Conread position: 35-326
Cow position:
Alignm length: 315
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 32

Conread position: 38-474
Cow position:
Alignm length: 463
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 38-479
Cow position:
Alignm length: 474
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 39-255
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 163

Conread position: 48-428
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 382

Conread position: 58-365
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 59-478
Cow position:
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 425

Conread position: 59-482
Cow position:
Alignm length: 442
Alignm identity: 284
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 6

Conread position: 63-482
Cow position:
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 9

Conread position: 68-480
Cow position:
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 291

Conread position: 70-478
Cow position:
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 246

Conread position: 86-288
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 195

Conread position: 86-368
Cow position:
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 86-477
Cow position:
Alignm length: 419
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 239

Conread position: 86-478
Cow position:
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 86-478
Cow position:
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 391

Conread position: 86-480
Cow position:
Alignm length: 419
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 236

Conread position: 86-480
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 88-453
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 263

Conread position: 105-473
Cow position:
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 106-479
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 129

Conread position: 119-266
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 128-480
Cow position:
Alignm length: 370
Alignm identity: 237
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 179

Conread position: 129-473
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 155-479
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 158-479
Cow position:
Alignm length: 339
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 205

Conread position: 159-397
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 159-477
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 171

Conread position: 159-482
Cow position:
Alignm length: 345
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 160-481
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 141

Conread position: 162-419
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 163

Conread position: 163-480
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 243

Conread position: 192-453
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 130

Conread position: 193-479
Cow position:
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.