Cow genome map

Conread name: rsag15_c7.y1

Conread position: 18-262
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 40

Conread position: 18-300
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 99

Conread position: 18-371
Cow position:
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 18-450
Cow position:
Alignm length: 466
Alignm identity: 296
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 213

Conread position: 18-477
Cow position:
Alignm length: 486
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 18-479
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 19-168
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 19-199
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 19-223
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 52

Conread position: 19-230
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 19-231
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 56

Conread position: 19-231
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 44

Conread position: 19-278
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 19-283
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 19-286
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 46, 19

Conread position: 19-286
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 19-288
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 19-307
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 130, 36

Conread position: 19-350
Cow position:
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 19-350
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 19-357
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 95, 49

Conread position: 19-361
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-368
Cow position:
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-368
Cow position:
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 19-402
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 224

Conread position: 19-409
Cow position:
Alignm length: 416
Alignm identity: 282
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 170

Conread position: 19-447
Cow position:
Alignm length: 458
Alignm identity: 303
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 404

Conread position: 19-453
Cow position:
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 52

Conread position: 19-459
Cow position:
Alignm length: 473
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 19-459
Cow position:
Alignm length: 478
Alignm identity: 310
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 95, 49

Conread position: 19-468
Cow position:
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 19-468
Cow position:
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 418

Conread position: 19-468
Cow position:
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 347

Conread position: 19-471
Cow position:
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 19-474
Cow position:
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 287

Conread position: 19-474
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 19-475
Cow position:
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-476
Cow position:
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 19-478
Cow position:
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 19-478
Cow position:
Alignm length: 486
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 160

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 495
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 267

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 58

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 395

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 395

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 81

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 19-479
Cow position:
Alignm length: 480
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 453

Conread position: 19-479
Cow position:
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 300

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-479
Cow position:
Alignm length: 499
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 12

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 19-479
Cow position:
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 53

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 196

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-480
Cow position:
Alignm length: 498
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-480
Cow position:
Alignm length: 491
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 318

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-481
Cow position:
Alignm length: 494
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 287

Conread position: 19-481
Cow position:
Alignm length: 498
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 126

Conread position: 19-481
Cow position:
Alignm length: 489
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 19-482
Cow position:
Alignm length: 496
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 301

Conread position: 20-231
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 20-252
Cow position:
Alignm length: 242
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 51, 181

Conread position: 20-288
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 65

Conread position: 20-297
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 18

Conread position: 20-426
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 20-478
Cow position:
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 176

Conread position: 20-478
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 281

Conread position: 20-478
Cow position:
Alignm length: 487
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 392

Conread position: 20-479
Cow position:
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 389

Conread position: 20-479
Cow position:
Alignm length: 487
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 20-479
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 20-479
Cow position:
Alignm length: 489
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 297

Conread position: 20-479
Cow position:
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 55

Conread position: 20-479
Cow position:
Alignm length: 505
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 20-479
Cow position:
Alignm length: 488
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 20-479
Cow position:
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 20-479
Cow position:
Alignm length: 500
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-480
Cow position:
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 20-480
Cow position:
Alignm length: 493
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 20-480
Cow position:
Alignm length: 484
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 32

Conread position: 20-482
Cow position:
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 22

Conread position: 21-350
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 30, 58

Conread position: 22-161
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 26

Conread position: 22-479
Cow position:
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 23-458
Cow position:
Alignm length: 446
Alignm identity: 304
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 149

Conread position: 27-452
Cow position:
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 30-205
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 30-441
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 80

Conread position: 31-437
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 27

Conread position: 32-348
Cow position:
Alignm length: 341
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 32-479
Cow position:
Alignm length: 479
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 34-404
Cow position:
Alignm length: 391
Alignm identity: 267
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 37, 77

Conread position: 38-283
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 37

Conread position: 38-468
Cow position:
Alignm length: 461
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 397

Conread position: 39-478
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 68

Conread position: 39-479
Cow position:
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 39-480
Cow position:
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 44-474
Cow position:
Alignm length: 448
Alignm identity: 296
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 187, 19

Conread position: 63-361
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 315

Conread position: 63-478
Cow position:
Alignm length: 437
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 65-350
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 65-466
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 24

Conread position: 86-450
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 87

Conread position: 86-477
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 62

Conread position: 86-479
Cow position:
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 86-479
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 217

Conread position: 86-479
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 88-389
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 81

Conread position: 88-468
Cow position:
Alignm length: 402
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 218

Conread position: 88-482
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 331

Conread position: 89-220
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 89-461
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 61, 347

Conread position: 92-475
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 97-436
Cow position:
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 172

Conread position: 97-479
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 127-479
Cow position:
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 253

Conread position: 135-476
Cow position:
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 138-482
Cow position:
Alignm length: 360
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 305

Conread position: 158-479
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 31

Conread position: 159-454
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 74, 22

Conread position: 159-479
Cow position:
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 160-479
Cow position:
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 318

Conread position: 164-478
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 183-482
Cow position:
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 179

Show alignments to all cow chromosomes.