Cow genome map

Conread name: rsag15_c7.y1

Conread position: 1-474
Cow position:
Alignm length: 490
Alignm identity: 312
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 148, 90

Conread position: 1-478
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 59

Conread position: 14-169
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 14-338
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 49

Conread position: 14-479
Cow position:
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 135

Conread position: 15-478
Cow position:
Alignm length: 506
Alignm identity: 336
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 24

Conread position: 18-221
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 47

Conread position: 18-368
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 215, 81

Conread position: 18-481
Cow position:
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 54

Conread position: 19-181
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 19-181
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 19-195
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 19-231
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 19-234
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 19-293
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 282

Conread position: 19-295
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 202

Conread position: 19-367
Cow position:
Alignm length: 369
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 19-398
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 122

Conread position: 19-399
Cow position:
Alignm length: 412
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-407
Cow position:
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 19-421
Cow position:
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 19-421
Cow position:
Alignm length: 431
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-427
Cow position:
Alignm length: 446
Alignm identity: 303
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 281

Conread position: 19-428
Cow position:
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 19-450
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 417

Conread position: 19-453
Cow position:
Alignm length: 471
Alignm identity: 317
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 19

Conread position: 19-467
Cow position:
Alignm length: 486
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 167

Conread position: 19-468
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 19-468
Cow position:
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 19-473
Cow position:
Alignm length: 484
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 378

Conread position: 19-473
Cow position:
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 480

Conread position: 19-476
Cow position:
Alignm length: 484
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-477
Cow position:
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-477
Cow position:
Alignm length: 486
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 334

Conread position: 19-477
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 19-478
Cow position:
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 166

Conread position: 19-478
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 19-478
Cow position:
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 19-479
Cow position:
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 19-479
Cow position:
Alignm length: 482
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 65

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 310

Conread position: 19-479
Cow position:
Alignm length: 490
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 394

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 19-479
Cow position:
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 201

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 286

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 184

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 324

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 19-479
Cow position:
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 19-479
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 457

Conread position: 19-479
Cow position:
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 19-479
Cow position:
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 462

Conread position: 19-479
Cow position:
Alignm length: 505
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 463

Conread position: 19-479
Cow position:
Alignm length: 494
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-479
Cow position:
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 432

Conread position: 19-480
Cow position:
Alignm length: 475
Alignm identity: 316
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 20

Conread position: 19-480
Cow position:
Alignm length: 498
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-480
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 19-480
Cow position:
Alignm length: 493
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 354

Conread position: 19-480
Cow position:
Alignm length: 487
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 68

Conread position: 19-480
Cow position:
Alignm length: 494
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 19-481
Cow position:
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 74

Conread position: 19-481
Cow position:
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 19-482
Cow position:
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 68

Conread position: 19-482
Cow position:
Alignm length: 503
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 176

Conread position: 19-482
Cow position:
Alignm length: 486
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 19-482
Cow position:
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 196

Conread position: 20-198
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 46

Conread position: 20-230
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 157

Conread position: 20-231
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 47, 114

Conread position: 20-326
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 175

Conread position: 20-378
Cow position:
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 375

Conread position: 20-477
Cow position:
Alignm length: 493
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 279

Conread position: 20-478
Cow position:
Alignm length: 489
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-478
Cow position:
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 123

Conread position: 20-479
Cow position:
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 51

Conread position: 20-479
Cow position:
Alignm length: 493
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 20-479
Cow position:
Alignm length: 472
Alignm identity: 319
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 213, 17

Conread position: 20-479
Cow position:
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 20-479
Cow position:
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 440

Conread position: 20-480
Cow position:
Alignm length: 484
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 257

Conread position: 20-481
Cow position:
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 328

Conread position: 20-482
Cow position:
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 20-482
Cow position:
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 455

Conread position: 22-351
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 20

Conread position: 22-479
Cow position:
Alignm length: 485
Alignm identity: 325
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 120

Conread position: 26-476
Cow position:
Alignm length: 480
Alignm identity: 316
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 347

Conread position: 29-477
Cow position:
Alignm length: 482
Alignm identity: 326
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 302

Conread position: 29-478
Cow position:
Alignm length: 479
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 448

Conread position: 30-482
Cow position:
Alignm length: 486
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 32-479
Cow position:
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 33-479
Cow position:
Alignm length: 476
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 38-225
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 157

Conread position: 63-367
Cow position:
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 72-479
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 247

Conread position: 86-363
Cow position:
Alignm length: 300
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 86-368
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 73

Conread position: 86-477
Cow position:
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 48

Conread position: 88-479
Cow position:
Alignm length: 407
Alignm identity: 271
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 25

Conread position: 100-306
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 129-472
Cow position:
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 129-479
Cow position:
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 142-457
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 324

Conread position: 142-479
Cow position:
Alignm length: 360
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 150-478
Cow position:
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 298

Conread position: 159-474
Cow position:
Alignm length: 331
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 301

Conread position: 160-368
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 160-449
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 127

Conread position: 160-479
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 161-451
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 174-481
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 183-445
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 108

Conread position: 193-479
Cow position:
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.